| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0020 |
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| Symbol | |
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| ID | 8322066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 18791 |
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| End bp | 20422 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644951167 |
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| Product | Chitinase |
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| Protein accession | YP_003108668 |
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| Protein GI | 256370844 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00474187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACACG ACGAGCTCTC TCCGCTTGGT GACCACTCAT TGCAGCCTTT GATCACTGTC
AGTGATCTCG TGATGCCGCA CGAGCTGGAG GGAGACGGTC CGGATCGGAA GCCGCCGCTC
GGGGAGCGCC TGCGCCGCTA CAGCCCTGTG CGGATCCTCA TGGGCCTCAT GGTGCTCGGT
GGAGCTGGCT CGCTGGCGGC GTGGCGCATC CACCAGCGGA TCATCGACGC AGCGCCGGTC
CACGCGACCT ACTTCGCCCC GTACGTCGAC GCCACGCTGT CGCCGACCTA TGCGTTCCAG
GATCCGACCC AGAACGACGC GAAGCAGACG GTGCTCGGGT TCGTCGTCGC GAGCGGCACG
AACGGCTGCT CACCCACCTG GGGTGGCGTC TATACCCCGA GCGCCGCCAA CCAGGACCTC
GCCCTGAACT CCCGGCTCGC CGAGTACGCC AGCATCGGCG GGACCGCGAT CGTGTCCTTC
GGCGGCCAAG CCCACACCCA CTTGTCGATG GCGTGCACGA CGCCGACGTC GCTGGCCGCC
GCGTACCAGC AGATCATCCG CCAGTACGAC CAACACATCG TCGACTTCGA TATCGAGGGC
CCCGCGCTCA CGAGTCAAGC GGCGACGCTC CGACGGGCAG CCGCGCTGTC GATCGTGGCT
CACGAAGACC CCGGGATCCA GATCTGGCTC ACGCTACCAG CGACACCCCA GGGACTGTCG
GACCCAGGCA TCGCGGCGAT CCGCGCGATG CTCCTCAAGC GGGTTCCTCT CGCTGGCGTC
AACGTGATGA CAATGGACTT CACCTCGACG CCCGGGGGCC TCGTCCAAAC CGCCGAGAGC
GCACTCACGG CGGCACACCA GCAGCTCACG ACCCTGTTCG CCGAGTACCG TATCCCCCTC
AACTCCCACC AGATCTGGAA CCACATGGGT GTGACGTTCC AGATCGGTCA GAACAACGTC
GTCGGTCAAC GGGTGAGCCT CCAGGGCGCG TCGCAGCTCG TGGCGTGGTC GACGTCACAG
GCGATCGGGC GGGTCTCGTT CTGGTCGCTG AACCGTGATG CGCCGTGCGC CGCATCGCTG
GCGAACGAAG CCGTCTACTC GAACACCTGC TCCGACGCAC AGACAGCCCC GCTCGCGTTC
TCGAGCGAGA TCGAGCATCA GATCCCTGCG TCCGTGCAAC GCGGTCGCGG GCTGATCCAG
GTCACGACCA CGGTGAGCGC CAACCCAGCC AACGCGCCCT TCCCGATCTG GAGCGCGTCC
TTCCCCTATC CCGCCGGCTA CAAGGTGGTG TGGGGTGGCT ACATCTACGA GGCCAAGTGG
TACAACCAGG GCCAACAGCC CACGCAGCAG TTCGAGTATG CCTACCAGAC GCCATGGGAA
CTCCTCGGAC CGGTGCTGGA GAGCGATCAC GCACCGACAC TCCCGACGCT GCCTCCAGGG
GCCGATCCGA CTTGGGAGCC CACCGTCACG TACCAACCCG GTCAGGTCGT GGAGTTCGAG
GGTCTTCCTT ATCAGGCCAA GTGGGCCAAC CAGGCCCAGA GCCCGGCCTC CGCGATGGCC
GATCCGACGA TCTCTCCCTG GCAGCCGCTC TGGAGCTACC CGGGTGAGCC GCCGCTGACG
GCCACCAACT GA
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| Protein sequence | MSHDELSPLG DHSLQPLITV SDLVMPHELE GDGPDRKPPL GERLRRYSPV RILMGLMVLG
GAGSLAAWRI HQRIIDAAPV HATYFAPYVD ATLSPTYAFQ DPTQNDAKQT VLGFVVASGT
NGCSPTWGGV YTPSAANQDL ALNSRLAEYA SIGGTAIVSF GGQAHTHLSM ACTTPTSLAA
AYQQIIRQYD QHIVDFDIEG PALTSQAATL RRAAALSIVA HEDPGIQIWL TLPATPQGLS
DPGIAAIRAM LLKRVPLAGV NVMTMDFTST PGGLVQTAES ALTAAHQQLT TLFAEYRIPL
NSHQIWNHMG VTFQIGQNNV VGQRVSLQGA SQLVAWSTSQ AIGRVSFWSL NRDAPCAASL
ANEAVYSNTC SDAQTAPLAF SSEIEHQIPA SVQRGRGLIQ VTTTVSANPA NAPFPIWSAS
FPYPAGYKVV WGGYIYEAKW YNQGQQPTQQ FEYAYQTPWE LLGPVLESDH APTLPTLPPG
ADPTWEPTVT YQPGQVVEFE GLPYQAKWAN QAQSPASAMA DPTISPWQPL WSYPGEPPLT
ATN
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