Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0013 |
Symbol | |
ID | 8322059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 12858 |
End bp | 14492 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644951160 |
Product | hypothetical protein |
Protein accession | YP_003108661 |
Protein GI | 256370837 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.373989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGCGC GTCGTGTGGC CATCGGTCTC GCTGGGTCGA TCGCGGAGGT CCTCGTCCTG ACACCGTGGT CGCTCCCGAA TGAGCGCGTC GTGGCCCACC CCGTCGTCGT CGGGGCCGCG GCGGTGTGCG CCATCGCTGC GCTTGCGCTG TGGTGGCGGT GGGTGCTGGG GCGAGGTGGT GGCGACCATT CATCGATCCC CGACGGAGTC CGCGCCCCGG CGCGAGCGTC GGTCGCGGTC GATCTCGATC TCGACGCAGT CCCAGCCATC GAGGTGCCCG GCGTCGGGAT CGTCGCGATG GAACGCTCGA CGTCGCAGTG GGTCCTCGAG GTCGCCGCCG AGCAGGAGCT CCACCGCGTG GCGGAGCACG CCCGGCTGCA TCGGCCGCGA GGGATGGTGC CGCTCGCAGT GCCAGATCGC AACCCGGCCG CCGAGGACCT CCGCGCCCTC GTCCGCCTTG ACCATCGCGT CCGCTCCTCG CCAGCGCACG AGGGCTCGCT CACGCCGCTG CGCTCTGGCG AGGTCGTAGG GGGTCAGCGC CACACACACG CCGACGCAGG GTCGGCATGC ATTCGCGTCG TCGACCGGCT GGGCCAGCTT CGCGTGCTCA GCGGACTCGT CGGCATCGAG CCCGGCACCG GTCTCGACCT CATCGTCCAG CATCGGCTCT TGCCGTGGCT GGAGCCGGTT CGCTGTGTCG TGGTCGGGAT GCGACGTGAG GAGGTCGTGG CCTTGGCACG ATCGTCGGTG CTGGTCGTGT CCGACATCCG GCGGGCACAG GCGGTGCTCG ACGAGGCAGT GAGTGCGACG AATGGATTCC CGGTGCTGGT GGTCGTGCAT GGTGTCAGGC TTGCAATGGA TGACGTGCGT GCGCTCGGTG CGGCCGGACG CGTCGTGGTC GTCGAGACGA GTGGACCTCC CGACGTGTCC TTCGCCTCCA TCGATCGTGG GCGCTGGCAC GGCGCAGTGG AGCGGTTGAG TACGTTCGCG CCGACCCCCC TTCTGCCAGG TCAACTGCCA CCGCCCCCAC GACCCGGGAG ACCCTGGGTG CGCCTGTGCG GCCTCGAGCC ACGGCTCGAG GGCGTCGCCG CGAGCCGAGA CGCCGCACAG TTGGTCGCTG CGCTCGTGCT CGACGGCGGC CGCGCCACGA TCGACGCGTT GGCCGACGCG CTCGAGCGTC CGGCGCGGAC CGTTCGATCC CTCGCACGCG AGGTGCCCAC CTGTGTGGAC GACGAGCGTG ACGGGCTCCG GTTGCGCCCA GGTGTGGGAT CCGATCTCGG CCTCGTCCAC CGGGTCGACG AGGCGATCCG CATCGTCGAC CTCGTGGCGA GGCCGCCACT TGCCGCCTAC GAGCAGCCGT GGTTTCGCGC TCGAGCGCCG GTCCTGGAGG CGGTCCTCGT CGACTCCCTG CTCGCCACCG CGGAGGCACT CGAGCGCGCG GACGCTCGTG GTGAGGCGAA GGTGATCGTG CGGCTCGTCC GCCGGACATT CGGACCGCTC GAGCGGCTCG AAGGCGGCGG TCTGCGCCCC GACGGGACCA CGGGTGCAGA CGAGGGCGTC GCCCGGAGCG AGGAGGTCGG CACCCACGTG CCACGAGCGG CGTTGGTGAG GCCAGGAGCC GTGGGGTCGT GGTGA
|
Protein sequence | MSARRVAIGL AGSIAEVLVL TPWSLPNERV VAHPVVVGAA AVCAIAALAL WWRWVLGRGG GDHSSIPDGV RAPARASVAV DLDLDAVPAI EVPGVGIVAM ERSTSQWVLE VAAEQELHRV AEHARLHRPR GMVPLAVPDR NPAAEDLRAL VRLDHRVRSS PAHEGSLTPL RSGEVVGGQR HTHADAGSAC IRVVDRLGQL RVLSGLVGIE PGTGLDLIVQ HRLLPWLEPV RCVVVGMRRE EVVALARSSV LVVSDIRRAQ AVLDEAVSAT NGFPVLVVVH GVRLAMDDVR ALGAAGRVVV VETSGPPDVS FASIDRGRWH GAVERLSTFA PTPLLPGQLP PPPRPGRPWV RLCGLEPRLE GVAASRDAAQ LVAALVLDGG RATIDALADA LERPARTVRS LAREVPTCVD DERDGLRLRP GVGSDLGLVH RVDEAIRIVD LVARPPLAAY EQPWFRARAP VLEAVLVDSL LATAEALERA DARGEAKVIV RLVRRTFGPL ERLEGGGLRP DGTTGADEGV ARSEEVGTHV PRAALVRPGA VGSW
|
| |