Gene Afer_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0013 
Symbol 
ID8322059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp12858 
End bp14492 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content72% 
IMG OID644951160 
Producthypothetical protein 
Protein accessionYP_003108661 
Protein GI256370837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.373989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGC GTCGTGTGGC CATCGGTCTC GCTGGGTCGA TCGCGGAGGT CCTCGTCCTG 
ACACCGTGGT CGCTCCCGAA TGAGCGCGTC GTGGCCCACC CCGTCGTCGT CGGGGCCGCG
GCGGTGTGCG CCATCGCTGC GCTTGCGCTG TGGTGGCGGT GGGTGCTGGG GCGAGGTGGT
GGCGACCATT CATCGATCCC CGACGGAGTC CGCGCCCCGG CGCGAGCGTC GGTCGCGGTC
GATCTCGATC TCGACGCAGT CCCAGCCATC GAGGTGCCCG GCGTCGGGAT CGTCGCGATG
GAACGCTCGA CGTCGCAGTG GGTCCTCGAG GTCGCCGCCG AGCAGGAGCT CCACCGCGTG
GCGGAGCACG CCCGGCTGCA TCGGCCGCGA GGGATGGTGC CGCTCGCAGT GCCAGATCGC
AACCCGGCCG CCGAGGACCT CCGCGCCCTC GTCCGCCTTG ACCATCGCGT CCGCTCCTCG
CCAGCGCACG AGGGCTCGCT CACGCCGCTG CGCTCTGGCG AGGTCGTAGG GGGTCAGCGC
CACACACACG CCGACGCAGG GTCGGCATGC ATTCGCGTCG TCGACCGGCT GGGCCAGCTT
CGCGTGCTCA GCGGACTCGT CGGCATCGAG CCCGGCACCG GTCTCGACCT CATCGTCCAG
CATCGGCTCT TGCCGTGGCT GGAGCCGGTT CGCTGTGTCG TGGTCGGGAT GCGACGTGAG
GAGGTCGTGG CCTTGGCACG ATCGTCGGTG CTGGTCGTGT CCGACATCCG GCGGGCACAG
GCGGTGCTCG ACGAGGCAGT GAGTGCGACG AATGGATTCC CGGTGCTGGT GGTCGTGCAT
GGTGTCAGGC TTGCAATGGA TGACGTGCGT GCGCTCGGTG CGGCCGGACG CGTCGTGGTC
GTCGAGACGA GTGGACCTCC CGACGTGTCC TTCGCCTCCA TCGATCGTGG GCGCTGGCAC
GGCGCAGTGG AGCGGTTGAG TACGTTCGCG CCGACCCCCC TTCTGCCAGG TCAACTGCCA
CCGCCCCCAC GACCCGGGAG ACCCTGGGTG CGCCTGTGCG GCCTCGAGCC ACGGCTCGAG
GGCGTCGCCG CGAGCCGAGA CGCCGCACAG TTGGTCGCTG CGCTCGTGCT CGACGGCGGC
CGCGCCACGA TCGACGCGTT GGCCGACGCG CTCGAGCGTC CGGCGCGGAC CGTTCGATCC
CTCGCACGCG AGGTGCCCAC CTGTGTGGAC GACGAGCGTG ACGGGCTCCG GTTGCGCCCA
GGTGTGGGAT CCGATCTCGG CCTCGTCCAC CGGGTCGACG AGGCGATCCG CATCGTCGAC
CTCGTGGCGA GGCCGCCACT TGCCGCCTAC GAGCAGCCGT GGTTTCGCGC TCGAGCGCCG
GTCCTGGAGG CGGTCCTCGT CGACTCCCTG CTCGCCACCG CGGAGGCACT CGAGCGCGCG
GACGCTCGTG GTGAGGCGAA GGTGATCGTG CGGCTCGTCC GCCGGACATT CGGACCGCTC
GAGCGGCTCG AAGGCGGCGG TCTGCGCCCC GACGGGACCA CGGGTGCAGA CGAGGGCGTC
GCCCGGAGCG AGGAGGTCGG CACCCACGTG CCACGAGCGG CGTTGGTGAG GCCAGGAGCC
GTGGGGTCGT GGTGA
 
Protein sequence
MSARRVAIGL AGSIAEVLVL TPWSLPNERV VAHPVVVGAA AVCAIAALAL WWRWVLGRGG 
GDHSSIPDGV RAPARASVAV DLDLDAVPAI EVPGVGIVAM ERSTSQWVLE VAAEQELHRV
AEHARLHRPR GMVPLAVPDR NPAAEDLRAL VRLDHRVRSS PAHEGSLTPL RSGEVVGGQR
HTHADAGSAC IRVVDRLGQL RVLSGLVGIE PGTGLDLIVQ HRLLPWLEPV RCVVVGMRRE
EVVALARSSV LVVSDIRRAQ AVLDEAVSAT NGFPVLVVVH GVRLAMDDVR ALGAAGRVVV
VETSGPPDVS FASIDRGRWH GAVERLSTFA PTPLLPGQLP PPPRPGRPWV RLCGLEPRLE
GVAASRDAAQ LVAALVLDGG RATIDALADA LERPARTVRS LAREVPTCVD DERDGLRLRP
GVGSDLGLVH RVDEAIRIVD LVARPPLAAY EQPWFRARAP VLEAVLVDSL LATAEALERA
DARGEAKVIV RLVRRTFGPL ERLEGGGLRP DGTTGADEGV ARSEEVGTHV PRAALVRPGA
VGSW