Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_7090 |
Symbol | |
ID | 8331311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8238936 |
End bp | 8240252 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644947517 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003104726 |
Protein GI | 256381066 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.635615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAC CCGGACAGCC CGCCAAGCAG GGCCCCAGAA GTCTCGACCC GCATCTGCGC AGGTACGCGG CGCGCACCGC GGGCATGACG GCATCGGAGA TCCGGGCGCT GTTCGCGGTG GCGAGCCGTC CCGAGGTGGT GTCGCTGGCG GGCGGGATGC CCCACTTGGC CGCGCTCCCG ATGGAGTCGC TGAGCGCCGA GGTCGGCCAG CTCCTGGCCA CCGACGGGCT CGTGGCGCTC CAGTACGGCT CCGCGCAGGG CATCCCGGTG CTGCGCGAGC AGATCTGCGA CGTGATGGCC CTGGAGGGCG TCTCCGCGCA CCCGGACGAC GTCGTGGTGA CCGTCGGCTC CCAGATGGGC CTGGACATGG TCACCCGGCT GTTCTGCGAC CCCGGTGACG TGGTGCTCGC CGAGGGCCCG TCGTACGTGG GCGCGCTCGG CTCGTTCGCC GCCTACCAGG CGCAGGTCGT GCACGTGGGC ATGGACGCCG AGGGCCTGGT GCCCGAGGCG CTGCGGGAGG CGATCGCGGG CGTCGAGCGC GCCGGGCGCC GCATCAAGTT CCTGTACACG ATCCCGAACT TCCACAACCC CGCCGGCGTC ACGCTGGCCG TGCAGCGGCG GGCCGAGGTG CTGGAGATCT GCCGCCAGCA CAACATCCTC GTGGTCGAGG ACAACCCGTA CGGGCTGCTC GGCTTCGACG GCCAGACCTA CCCGGCGCTG CGCTCCAGCG ACCCGGACAA CGTGGTCTAC CTGGGCTCGT TCTCCAAGAC CTTCGCCGCC GGCCTGCGGG TCGGCTGGGT GCTCGCGCCG CACGCCGTGC GGGAGAAGCT GGTGCTGGCC GCCGAGTCCG CCACGCTGTG CCCGCCCACG CTCAACCAGA TGATCGTCTC CCGCTACCTG GAGACGCACG ACTGGAAGGG CCAGATCAAG ACCTACCGCG AGGCCTACCG CGAGCGCCGG GACGCGGCGA TCTCCGCTCT GGAGCAGCAC ATGCCGGTTG GTTCCACGTG GAACAAGCCC GACGGCGGGT TCTACGTGTG GCTGACCGTG CCGGAGGGCA TCGACACCAA GGCGATGCTG CCGCGCGCGA TCACGCAGCG GGTGGCGTAC GCCTCGGGCA CCGGTTTCTA CGCGGACGGG CTGGGCAGCA GGCAGCTGCG CATCTCGTAC TGCTACCCGA CGCCGGAGCG CATCCGGGAA GGCGTCCGCC GACTGGCGAA CGTCATCAAG GACGAGATGG AGCTGCACGA GACGTTCGGG CCCGCCACGG GTCGCGCCGT CTCCGGTCCG CAGGCCCCCT CGCCCGACAC CGCATGA
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Protein sequence | MTAPGQPAKQ GPRSLDPHLR RYAARTAGMT ASEIRALFAV ASRPEVVSLA GGMPHLAALP MESLSAEVGQ LLATDGLVAL QYGSAQGIPV LREQICDVMA LEGVSAHPDD VVVTVGSQMG LDMVTRLFCD PGDVVLAEGP SYVGALGSFA AYQAQVVHVG MDAEGLVPEA LREAIAGVER AGRRIKFLYT IPNFHNPAGV TLAVQRRAEV LEICRQHNIL VVEDNPYGLL GFDGQTYPAL RSSDPDNVVY LGSFSKTFAA GLRVGWVLAP HAVREKLVLA AESATLCPPT LNQMIVSRYL ETHDWKGQIK TYREAYRERR DAAISALEQH MPVGSTWNKP DGGFYVWLTV PEGIDTKAML PRAITQRVAY ASGTGFYADG LGSRQLRISY CYPTPERIRE GVRRLANVIK DEMELHETFG PATGRAVSGP QAPSPDTA
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