Gene Amir_7063 details

Gene Information

• Locus tag: Amir_7063
• Symbol: tdh
• ID: 8331284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 8206231
• End bp: 8207265
• Gene Length: 1035 bp
• Protein Length: 344 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644947491
• Product: L-threonine 3-dehydrogenase
• Protein accession: YP_003104700
• Protein GI: 256381040
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases
• TIGRFAM ID: [TIGR00692] L-threonine 3-dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGCAC TGGTCAAGGC TGAGGCCGGG CCGGGACTCT CGTTGACCGA GGTCCCCGAC 
CCCACCCCCG GCGCGGGGGA CGTGCTGGTG CGCGTCCTGC GCACCGGCAT CTGCGGCACC 
GATCTGCACA TCGACTCGTG GGACGAGTGG GCGGCGCGCA CCGTGCGCGC CCCCCTCGTG 
CTCGGCCACG AGTTCACCGG CGAGGTCGCG GCCGTCGGCT CCTCGGTCAC GGACGTCAAG 
GTCGGCGACC TGGTCAGCGG CGAGGGCCAC CTGGTGTGCG GGGCGTGCCG CAACTGCAAG 
GCGGGCCGCA GGCACCTGTG CGCCAACACG CGCGGCCTGG GCGTGCACGA GAACGGCGCG 
TTCGCCGAGT ACGTGGTGCT GCCCGAGGCG AACGCCTGGG TGCACCGCGC GCCCGTCGAC 
CTGGACGTGG CGGCGATCTT CGACCCGTTC GGGAACGCCG TGCACACCGC GCTGTCGTTC 
CCGGTGATCG GCGAGGACGT GCTGATCACC GGCGCGGGCC CGATCGGGAT CATGGCCGCC 
GCCGTGGCCA GGCACGCGGG CGCCAGGCAC GTGGTGATCA CCGACGTGAG CGAGCACCGG 
CTGGAGCTGG CCCGCGCGGT CGGCGTGGAC CTGGCGCTGG ACGTGTCCCG GCGGACGCTG 
GCCGAGGCGC AGGTCGAGCT GGGCCTGACC GAGGGCTTCG ACGTCGGCAT GGAGATGTCC 
GGCCAGCCCG TCGCGCTCCA GGACATGATC GGCAACATGG CGCACGGCGG GCGCATCGCG 
ATGCTGGGCC TGCCCGCGTC GGACTTCGCC GTCGACTGGA GCAGCGTGGT GCTGAAGATG 
CTGCACCTCA AGGGCGTCTA CGGCCGGGAG ATGTTCGAGA CCTGGTACTC GATGTCGGTG 
CTGCTGGAGC GCGGGCTCGA CCTGTCCCCG GTGATCACGC ACCGGTTCGA CCACACCGAC 
TTCCGGGAGG CCTTCGCCAC GGCGCGCGGG GGCAAGTGCG GCAAGGTCAT CCTCGACTGG 
ACGGGAGCTG CCTGA 

 

Protein sequence

MKALVKAEAG PGLSLTEVPD PTPGAGDVLV RVLRTGICGT DLHIDSWDEW AARTVRAPLV 
LGHEFTGEVA AVGSSVTDVK VGDLVSGEGH LVCGACRNCK AGRRHLCANT RGLGVHENGA 
FAEYVVLPEA NAWVHRAPVD LDVAAIFDPF GNAVHTALSF PVIGEDVLIT GAGPIGIMAA 
AVARHAGARH VVITDVSEHR LELARAVGVD LALDVSRRTL AEAQVELGLT EGFDVGMEMS 
GQPVALQDMI GNMAHGGRIA MLGLPASDFA VDWSSVVLKM LHLKGVYGRE MFETWYSMSV 
LLERGLDLSP VITHRFDHTD FREAFATARG GKCGKVILDW TGAA