Gene Amir_6997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6997 
Symbol 
ID8331218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp8138036 
End bp8138734 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content75% 
IMG OID644947427 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003104636 
Protein GI256380976 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG CTGAAGCCGG CACCTGGCTC CGCGCGCTCG CCGAGGACGG CGCGCGGATG 
AGCCGGTCCA GCACGGCCGA GCGGGTCGCC GACGCGCTCA GGGCACGGGT GCTCGACGGG 
GCCATCAGAG CGGGCAGCCA GCTGTCCGAG AAGTCGCTCG GCGACGCGCT GCGCGTCTCC 
CGCAACACCC TGCGCGAGGC GTTCCGGCTC CTGACCCACG AGCGCCTGCT GGTGCACGAG 
CACAGCCGGG GCGTGTTCGT GCGGGTGCCG AGCACCGAGG ACGTGGCCGA CCTGTACGCC 
GCCCGCCGGG TGATCGAGGC GGGCGCGCTG CGGCGGTGGC CCGACGCGCC CGAGGAGCGG 
CGCGCGCGGG TCGGGGACGC GGTCCGGTGG GCCGAGCGGC TGCGGGACGA CGAGGACTGG 
GTGGGCGTGG GCACGGCGAA CGGCCGGTTC CACGCGGCGA TCACCGCGCT CGCGGGCAGC 
TCCCGGCTGG ACGAGGAGAT GCGCCGCCTG CTCGCCGAGC TGCGCCTGGT GTTCCAGGTG 
GTGGGGGACC CCGAAGGCTT CCACCGCGAC TACCTGCCGA GGAACCGCGC GATCGCCGAC 
CTGCTGGAGT CGGGTGAGGT CGACGCCGCC GAGTCGGCGC TGCTGTCCTA CCTGGACACC 
GCCGAGGAGC ACGTCACCCG AGGGCTGGGC ACGCTCTAG
 
Protein sequence
MTTAEAGTWL RALAEDGARM SRSSTAERVA DALRARVLDG AIRAGSQLSE KSLGDALRVS 
RNTLREAFRL LTHERLLVHE HSRGVFVRVP STEDVADLYA ARRVIEAGAL RRWPDAPEER 
RARVGDAVRW AERLRDDEDW VGVGTANGRF HAAITALAGS SRLDEEMRRL LAELRLVFQV 
VGDPEGFHRD YLPRNRAIAD LLESGEVDAA ESALLSYLDT AEEHVTRGLG TL