Gene Amir_6996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6996 
Symbol 
ID8331217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8136356 
End bp8137858 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content78% 
IMG OID644947426 
Producthypothetical protein 
Protein accessionYP_003104635 
Protein GI256380975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCTTCC CACTGCGCAC GGTGACACCG GTGCTGGCCG CCCTGACGAT CGCCCTGACC 
GCCGCGCCCG CCGCGACGGC CGCTCCCGGA GCCGCTCCGG GGTGCTCCGA CCCCACCGCC
CCGCTGACCG TCGAGGAGCA GCGGCTCACC GCCGTCCTCG ACCCCGACGC CCCGCCGGTC
GGGCCGGAGC TGGCGCGGCT CGGCGGGTTC GACGACGAGG TGGCGCGGTT CGCCTCCGCC
CTGTGCGGCG TCGGGAAGCG GGACGCCGCG GGCCTGGCCC AGCGGACCGG CGAGGGGCTG
TGGCGGGCGG CGGTGGAGCG CGCCCAGGCG CCGCAGTCGT GGGACGCGCA CGACGACCGG
CCGCTGTACT GGGCGCGGCT GGGGATGACC AAGGCGCTGC GGCAGTGGAA GCCCCGGTGG
ACCCTGCCCG CCGCCGAGCG GTCCGCGCTG GTGGACCGGC TGGACCGGGC CTCGCGCGGG
CTGTCCGACG TCCGGTTCCG CGCGGACGCC GCGCCGACCG CCGTCCCGCG CGCGGCCGGG
GACGACAACG GTGGTGGCCG GGGCAGCGCC GACGGTCCCC ACGCCGCCGG TTCCCCCGCC
GCCGGGGTCA CGTCGCTCGA CCAGCTCGGC AGCACCATCG GCGCCGACCC GCTGGCCCTG
CTGGGCGCCC GGGCCGAGGC CGCGCCCGCC CCCGCCCCCG CCCCCGCCCC CGAGGAGCGC
ACCGCCCCCG AGGACCGCGC GGCGGTGCGG CGGATCGCGC TCACCGGGTT CGACCCGTTC
TTCCTCGACG GCTCCGGCAT CACCCGCAGC AACCCGTCCG GCGCGGCGGC GCTCCAGCTC
GACGGGCGGG TGTTCGACAC CCCGCAGGGC CGGGTCCTGG TGGAGGTGGC CGTGCTCCCG
GTGACCTGGG GCGAGTTCGA CAAGGGCATC GTCGAGCGCT TCTACGGCTC CACCGTCACC
GGCGGGCAGC GCCCGCACGC CTTCGTCACG GTCAGCCAGG GCAGGCCCGG CCAGTTCGAC
GTGGAGCGCT GGGCGGCGCG CTGGCGCGGC TGGTCGCCGG ACAACAACAA CGCGTCCTCG
CCCGGCGTGG TCCCGGACGC GGCGGGCTGG CCGCAGCCGT CGACCGAGTT CATCGAGACG
ACCCTGCCGC ACGAGCGGAT GACCACCACG CCGACCGGCG ACTACCCGGT GCTCTTCAAC
CGGGGCTTCT GCGAGTTCCC TGCGGGCGCG ACCCCCGCGC CGGGCGCGCA GCGGTGCGGG
ACGGGCGAGC CGACGCCGGG CGCGACGGCG GCCAGCGGCG GCGGTGGCGA CTACCTGTCG
AACGAGAGCA TGTACCGGGC CAACCGGGTG CGCACCGGCC TGGGCGCGAC CGACGTGCGC
GGCGGCCACC TGCACACCCC GGTCCTGAGC CAGCCCGAGG GGGACGCGCT GACCGACGGG
TTCTTCGAGG CCGAGCGCAG GGCCATCGCC GACCAGGTGG TCGCCCTGGT CGCCCTGGTC
TGA
 
Protein sequence
MIFPLRTVTP VLAALTIALT AAPAATAAPG AAPGCSDPTA PLTVEEQRLT AVLDPDAPPV 
GPELARLGGF DDEVARFASA LCGVGKRDAA GLAQRTGEGL WRAAVERAQA PQSWDAHDDR
PLYWARLGMT KALRQWKPRW TLPAAERSAL VDRLDRASRG LSDVRFRADA APTAVPRAAG
DDNGGGRGSA DGPHAAGSPA AGVTSLDQLG STIGADPLAL LGARAEAAPA PAPAPAPEER
TAPEDRAAVR RIALTGFDPF FLDGSGITRS NPSGAAALQL DGRVFDTPQG RVLVEVAVLP
VTWGEFDKGI VERFYGSTVT GGQRPHAFVT VSQGRPGQFD VERWAARWRG WSPDNNNASS
PGVVPDAAGW PQPSTEFIET TLPHERMTTT PTGDYPVLFN RGFCEFPAGA TPAPGAQRCG
TGEPTPGATA ASGGGGDYLS NESMYRANRV RTGLGATDVR GGHLHTPVLS QPEGDALTDG
FFEAERRAIA DQVVALVALV