| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6967 |
|---|
| Symbol | |
|---|
| ID | 8331188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 8101121 |
|---|
| End bp | 8102959 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644947399 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003104608 |
|---|
| Protein GI | 256380948 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.265007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCACTT CCCCCGTGAC GACCGCGCGA CGCCGTGCCC GTGTCCGTGC CCCCGAGCTC
GTCGGCCGGG GCTGGCTGAA CACCGGGGAC CAGGACATCA CCCTCGCCCA GCTCAGGGGC
AAGGTCGTCC TGCTCGACTT CTGGACCTTC TGCTGCATCA ACTGCCTGCA CGTCCTGGAC
GAGCTCCGCC CCCTGGAGGC CGAGTTCGCC GACGTCCTGG TCACCATCGG CGTCCACTCG
CCGAAGTTCG TCCACGAGGC CGACCCGGAC GCGCTGGTCG CCGCCGTCGA GCGGTACGAG
GTGCACCACC CCGTCCTCGA CGACCCCGAG CTGACCACCT GGCAGAACTA CGCCGTCAAG
GCCTGGCCGA CCCTCGTCGT GGTCGACCCC GAGGGCTACG TCGTGCACGT CGCCGCGGGT
GAGGGCCACG TCGACGCCCT GCGCCAGGTC ATCACCGAGC TGATCGCCGA GCACGAGGCC
AAGGGCACCC TCCACCGGGG CGACGGCCCG TACGTGGCCC CGCCGCCGCC GGACACCGCC
CTGCGCTTCC CCGCCAAGGC CGTCCTCACC CCGGCGGGCA CCCTCCTGGT CAGCGACTCC
GCCCACCACT CCCTGGTCGA GCTGGCCGCC GACGGCGAGA CCGTCCTGCG CCGCGTCGGC
ACCGGCGAGC GCGGGCGCGC GGACGGCCTG GAACCCACCT TCTCCGAGCC CGCGGGCATC
GCCCTGCTCC CGCCGGAGGT CGCCGCCACG ACCGGCTACC ACGCCGTCGT CGCCGACACC
GTCAACCACC TCCTGCGCGG CCTCAACCTG GACACCGGCG AGGTCACCAC CGTCGCGGGC
ACCGGCGAGC AGTGGCGCGA CGGGGCCACC GACGGCCCGG CCGACGAGAT CCCGCTGACC
AGCCCCTGGG ACGTGGTCTG GTGGGAACCG GCGAACGCGG TCGCCATCGC CCTCGCGGGC
AACCACACCC TCGGCCTGTT CGACCCGGTC GCGGGCAGGC TGGAGCGCCT CGCGGGCACC
ACCGTCGAGG GCCTCAACGA CGGCCCCGCC GACCAGGCGT TCTTCGCCCA GACCTCGGGC
CTGGCCTCGG ACGGCGAGCG CCTGTGGCTG GTCGACTCGG AGACCTCCGC CCTGCGCTGG
CTCGACCCCG ACCGCACCGT CCACACCGCC GTCGGCAAGG GCCTGTTCGA CTTCGGCCAC
CGCGACGGCC CCGCGGACCA GGCCCTCCTG CAGCACCCGC TGGGCGTCAC CGCCCTCCCG
GACGGCTCGG TCGCGATCGC CGACACCTAC AACGGCGCGG TCCGCCGCTA CGACCCGGCC
ACCGGCGAGG TCTCCACCAT CGCCACCGAC GTCGCCGAGC CGTCCGACGC CGTGCTCGTC
GACGGCGAGC TGGTCGTCGT CGCCTCCGCC GCGCACCGCC TGGAGCGCCC GGTCGCCCCC
GGCGTCCGGA TCACCGGGGA CGCCCACCGG GTGCGCCGCC CCCCGACCGA GATCGGCGTC
GGCGAGCTGG AGCTGGCCGT CGTCTTCACC CCGCCCACCG GCCAGAAGCT CGACGACCGC
TACGGCCCGT CCACCCGTCT GGAGATCACC AGCTCCCCGC CGGGGCTGCT GGTCGGCGGC
GCGGGCGTCG GCACGGACCT GGTGCGCGGG CTGCGCGTCG CCGAGGGCTT CACCGAGGGT
GTGCTGCACG TGGTCGCCCA GGCCGCGAGC TGCACCGACG ACCCTGCGGT CGAGCACCCG
GTCTGCAAGC TCACCCGCCA GGACTGGGGC GTCCCGGTCC GGATCACGCC GGACGGCCCG
TCCCGGCTGC CGCTGATGAT GGGCGGCCTG GACGGGTGA
|
|---|
| Protein sequence | MFTSPVTTAR RRARVRAPEL VGRGWLNTGD QDITLAQLRG KVVLLDFWTF CCINCLHVLD
ELRPLEAEFA DVLVTIGVHS PKFVHEADPD ALVAAVERYE VHHPVLDDPE LTTWQNYAVK
AWPTLVVVDP EGYVVHVAAG EGHVDALRQV ITELIAEHEA KGTLHRGDGP YVAPPPPDTA
LRFPAKAVLT PAGTLLVSDS AHHSLVELAA DGETVLRRVG TGERGRADGL EPTFSEPAGI
ALLPPEVAAT TGYHAVVADT VNHLLRGLNL DTGEVTTVAG TGEQWRDGAT DGPADEIPLT
SPWDVVWWEP ANAVAIALAG NHTLGLFDPV AGRLERLAGT TVEGLNDGPA DQAFFAQTSG
LASDGERLWL VDSETSALRW LDPDRTVHTA VGKGLFDFGH RDGPADQALL QHPLGVTALP
DGSVAIADTY NGAVRRYDPA TGEVSTIATD VAEPSDAVLV DGELVVVASA AHRLERPVAP
GVRITGDAHR VRRPPTEIGV GELELAVVFT PPTGQKLDDR YGPSTRLEIT SSPPGLLVGG
AGVGTDLVRG LRVAEGFTEG VLHVVAQAAS CTDDPAVEHP VCKLTRQDWG VPVRITPDGP
SRLPLMMGGL DG
|
|---|
| |