| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6963 |
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| Symbol | |
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| ID | 8331184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 8095175 |
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| End bp | 8097013 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644947395 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_003104604 |
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| Protein GI | 256380944 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCACT ACAAGAGCAA CGTCCGGGAC CTCGAGTTCA ACCTCTTCGA GGTCTTCACC
GTGCAGGACC ACCTCGGCAC GGGGCCGTTC GAGCAGGCCG ACGAGGAGAC CGCGCGCGGC
ATCCTCACCG AGCTGAACAA CCTCGCGGTC GGCCCGCTGG CCGACTCCTT CGCCGAGTCC
GACCGCAACC CCCCGGTCTT CGACCCGAAG ACCCACTCGG TGACCCTGCC CGAGGCGTTC
CGGCAGTCCT ACCGGGCGCT CTGGGACGGC GAGTGGTACC GCCTCTCGCT CCCGGAGGAC
CTGGGCGGCT TCGGCGTGCC CCCCTCGGTG CAGTGGGCGG CGTCCGAGCT GGTCCTGGGC
GCGAACCCGT CCGCGTACAT GTACATGGCG GGCCCCAACT TCGCCACGGT CGTGCACCGC
AACGGCACCG ACGAGCAGAA GCGCTGGGCC CAGTTCATGA TCGACGACGG CTGGGGCGCC
ACCATGGTGC TGACCGAGCC GGACGCCGGT TCGGACGTGG GCGCGGGCCG CACCAAGGCC
GTGCGGCAGG AGGACGGCTC CTGGCACCTG GACGGCGTGA AGCGGTTCAT CACCTCGGGC
GACCAGGACC TGACCGAGAA CATCATGCAC CTGGTGCTGG CTCGCCCCGA GGGCCCCGGC
ATCGAGTCGA GGCCGGGCAC CAAGGGCCTG TCGCTGTTCC TGGTGCCGAA GTTCCACTTC
GACTCCGAGA CCGGCAAGTC CACCGGTGAG CGCAACGGCG CCTTCGTCAC CAACGTCGAG
CACAAGATGG GCCTGAAGGC CTCCACGACC TGCGAGCTGA CCTTCGGCCA GCACGGCGTG
CCCGCCAAGG GCTGGCTGCT GGGCGAGGTG CACAACGGCA TCGCGCAGAT GTTCCAGGTC
ATCGAGTACG CCCGGATGAT GGTCGGCACC AAGGCCATCG GGACGCTCTC GACCGGCTAC
CTGAACGCGC TGGCGTACGC CAAGGAGCGG GTGCAGAGCG CCGACCTGAC CCGGATGACG
GACAAGACCG CGCCGCGCGT CACCATCACC CACCACCCGG ACGTGCGCCG CAGCCTGATG
CTGCAGAAGG CCTACGCCGA GGGCCTGCGC GCGGTGTACC TGTACACCGC GACGTTCCAG
GACAGGATCA AGCTCGGTGG CGAGGGCCAG GCGCTGGCCG AGAAGGTCAA CGACCTGCTG
CTGCCGGTGG TCAAGGGCGT CGGCTCCGAG CGCGCCTACG AGCAGCTCGC GCAGTCGCTG
CAGACGCTGG GCGGCTCCGG CTTCCTGCAG GACTACCCGA TCGAGCAGTA CATCCGCGAC
TCGAAGATCG ACTCGCTGTA CGAGGGCACC ACCGCGATCC AGTCGCTGGA CTTCTTCTTC
CGGAAGATCA TCCGCGACAA GGGCCAGGCG CTCGGCCACA TCAACGGCGA GATCCAGGCG
TTCCTCGACT CCGAGGGCGG CAACGGCAGG CTCAAGGAGG AGCGGGCGCT GCTCAAGCAG
GGCCTGGAGG ACCTCCAGGG GATGCTCGGC GCGCTCGTCG GGTTCCTGAC CTCCTCGCAG
GAGGACGTGG CCAACCTGTA CAAGGTCGGC CAGAACTCGG TGCGGCTGCT CATGACCGCC
GGTGACGTGC TGGTCGGCTG GCTGCTGCTG CGCCAGGCCG AGGTGGCGCT GACCAAGCTC
GCGGGCGAGC CGTCCGCCAA GGACAAGGCG TTCTACGAGG GCAAGGTCGC GGTGGCGTCG
TTCTTCGCCA AGACCGTGCT GCCCGAGCTG TCGGCGCGCC GCAAGTCCAC CGAGAGCACC
GACAACTCGC TGATGGACCT GGACGAGGCC GCGTTCTGA
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| Protein sequence | MGHYKSNVRD LEFNLFEVFT VQDHLGTGPF EQADEETARG ILTELNNLAV GPLADSFAES
DRNPPVFDPK THSVTLPEAF RQSYRALWDG EWYRLSLPED LGGFGVPPSV QWAASELVLG
ANPSAYMYMA GPNFATVVHR NGTDEQKRWA QFMIDDGWGA TMVLTEPDAG SDVGAGRTKA
VRQEDGSWHL DGVKRFITSG DQDLTENIMH LVLARPEGPG IESRPGTKGL SLFLVPKFHF
DSETGKSTGE RNGAFVTNVE HKMGLKASTT CELTFGQHGV PAKGWLLGEV HNGIAQMFQV
IEYARMMVGT KAIGTLSTGY LNALAYAKER VQSADLTRMT DKTAPRVTIT HHPDVRRSLM
LQKAYAEGLR AVYLYTATFQ DRIKLGGEGQ ALAEKVNDLL LPVVKGVGSE RAYEQLAQSL
QTLGGSGFLQ DYPIEQYIRD SKIDSLYEGT TAIQSLDFFF RKIIRDKGQA LGHINGEIQA
FLDSEGGNGR LKEERALLKQ GLEDLQGMLG ALVGFLTSSQ EDVANLYKVG QNSVRLLMTA
GDVLVGWLLL RQAEVALTKL AGEPSAKDKA FYEGKVAVAS FFAKTVLPEL SARRKSTEST
DNSLMDLDEA AF
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