Gene Amir_6959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6959 
Symboldcd 
ID8331179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp8090391 
End bp8091026 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID644947390 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_003104600 
Protein GI256380940 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.504327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACA CCCGCTTGCG GTGCGGCTCC GATCATACAC ATACGCTGTC AAGCGTGTTG 
CTCAGTGACC GCGATCTGCG CGGAGAAGTC GAGTCCGGGC GGCTCGTGGT CGAGCCGTTT 
GACGACTCCC TCGTCCAGCC CTCCAGCATC GACGTGCGGC TCGACCGGTT CTTCCGGGTC 
TTCAACAACA CCCGCTACAC CCACATCGAC CCGGCCGTGC AGCAGGACGA CCTCACCTCG 
CTCGTCGAGG CCGAGGGCGA CGACCCGTTC GTCCTGCACC CCGGCGAGTT CGTGCTCGGC 
TCCACCTACG AGCAGGTGAC GCTGCCGGAC GACCTGGCGG GCAGGCTGGA GGGCAAGTCC 
TCCCTCGGGC GCCTCGGGCT GCTCACGCAC TCCACGGCGG GGTTCATCGA CCCCGGCTTC 
ACCGGGCACA TCACCCTGGA GCTGTCGAAC GTCGCGAACC TGCCCATCAC GCTGTGGCCG 
GGCATGAAGA TCGGCCAGCT GTGCCTGTTC CGGCTCAGCA GCGCCGCCGA GTTCCCCTAC 
GGCTCGCGCG AGGCGGGCAG CCGGTACCAG GGGCAGCGCG GGCCGACGCC GTCGCGCGCG 
CACCTGAACT TCCGCCGCAC CGACACCCGC CGCTGA
 
Protein sequence
MNYTRLRCGS DHTHTLSSVL LSDRDLRGEV ESGRLVVEPF DDSLVQPSSI DVRLDRFFRV 
FNNTRYTHID PAVQQDDLTS LVEAEGDDPF VLHPGEFVLG STYEQVTLPD DLAGRLEGKS 
SLGRLGLLTH STAGFIDPGF TGHITLELSN VANLPITLWP GMKIGQLCLF RLSSAAEFPY 
GSREAGSRYQ GQRGPTPSRA HLNFRRTDTR R