Gene Amir_6914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6914 
Symbol 
ID8331134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8047983 
End bp8049062 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content73% 
IMG OID644947345 
Producthypothetical protein 
Protein accessionYP_003104555 
Protein GI256380895 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTGC GCGACGAACT GGCGCGCAGG CTGCGCCGGT GGCGGATGAC GGCCCTGCCG 
ATCCTCCAGG CAGCGGTGGC CGCGGGCCTG TCCTGGTTCG TGGCGACGAA GGTCGTCGGC
CACCCGCACC CGTTCTTCGC GCCCATCGCC GCCGTCGTCT GCCTCGGCGT CTCGCTGGGG
CAGCGCCCCC GGCGGGTCGC CGAGCTGGTC GTCGGCGTGT CCGTGGGCGT CGGCATCGGC
GACGTCCTGA TCTCCCACAT CGGCTCCGGC ACGTGGCAGA TCGCGGTGGC CGTGGTCCTG
GCGATGTCCG CCGCCGTCCT CCTGGACGGC GGCGCGGTCA TCGCCCTCCA GTCCGCCAAC
TCCGCGGTCC TGGTGGCCAC CTTGCTCCCA CCCAGCGCGG GCGGCGGCTT CGACCGCATG
GTCGACGCCC TGGTGGGCGG CGTGGTCGGC CTGGCGGTCA CCGCCCTCAT CCCCGCGAAC
CCCCTGACCG TGGCAGACCG CCAGGCGAAG GTCGTCCTGG GCGAACTGGC CATCGCCCTG
CGCGGCGTCG CCGCGGCCGT GGCCAAAAGC GACGCAGGCG CCGCAGCCGA CGTCCTGGCA
AGACTCCGCG ACAGCCAGGA GGCCGTCGAC GAGTACCGCT CCGCCCTCAA GACCGGCGGC
GAGATCGCCA CGATCGCCCC GATCCGCTGG CGCCGCAAGA ACGCCCTGCG CCGCTACGGC
AGCATCGCCA CCCCGGTCGA CTACGCCCTG CGCAACACCA GGGTCCTCAC CAGAAGGGCC
CTGGCCGCCC TGCGCGACGA CGAACACGTC CCGGACGTCC TCCCGTCAGC CCTGGAGCGC
TTCGCGGACG CCGTGGACGT CCTGCGCGCG GAACTGGCGT CCAACGAGGA CCCGGTGAAG
TCCAGAGCGG CGATCCGCGC GGCGGCAGGC GTCATGACGG CGGACCTGGC CGTGGGCGAG
GGCTTCTCAA CCCAGGTAGT CCTGGCCCAG GCCCGCTCGG TGGCGGTAGA CCTGCTCCAG
GCAACCGGCC TGACGAGGGT GGAGGCGATG GAATCGCTAC CACCACTGCG AAAGCCCTGA
 
Protein sequence
MAVRDELARR LRRWRMTALP ILQAAVAAGL SWFVATKVVG HPHPFFAPIA AVVCLGVSLG 
QRPRRVAELV VGVSVGVGIG DVLISHIGSG TWQIAVAVVL AMSAAVLLDG GAVIALQSAN
SAVLVATLLP PSAGGGFDRM VDALVGGVVG LAVTALIPAN PLTVADRQAK VVLGELAIAL
RGVAAAVAKS DAGAAADVLA RLRDSQEAVD EYRSALKTGG EIATIAPIRW RRKNALRRYG
SIATPVDYAL RNTRVLTRRA LAALRDDEHV PDVLPSALER FADAVDVLRA ELASNEDPVK
SRAAIRAAAG VMTADLAVGE GFSTQVVLAQ ARSVAVDLLQ ATGLTRVEAM ESLPPLRKP