| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6904 |
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| Symbol | |
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| ID | 8331124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 8036896 |
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| End bp | 8037885 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644947335 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_003104545 |
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| Protein GI | 256380885 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCT GGGTCGTGCG GGCCGCCGTC GGGGTGCTCG CGGTGGGACT GCTGGCGTCG
GGGTGCGGGG GCAAGCGCAC GCCGACCGGG GGCGCGTCCG GCGAGACCGG GGCGTGCGAG
GCGTCGGCCG GGCGGATCAC CATCGCCACC GGCAACTCCG GCGGCGTGTA CTACGTGGTC
GGCGGCGCGC TGGCGAAGCT GGTCAGCGAC AGCACGCCGC TCAAGGCCAC CGCGGCCGAG
ACGGGCGCGT CGGTGCAGAA CGTGAAGCAG CTCGTCGCGG GCGACTACGA CGTGGCGTTC
TCGCTCGCCG ACACCGCCGC CGACGCCGTC CGGGGAACCG GGGGCTTCGA GGGGCAGCCG
CAGAAGGTGA GCGCGCTGAC CAGGCTGTAC CCGAACTACA CGCAGGTGCT GGTGCGCGCG
GACAGCGGCA TCTCGTCGAT CGCGGACATG CGCGGCAAGC GGATCTCCAC CGGGTCGCCC
GGTTCCGGCA CCGAGGTCAT CGCGCACCGG CTGCTGGAGG CGGCGGGCCT CGACCCGGAC
GCCGACGTGC AGGCGCAGCG GCTCGACCTG GCCAAGACCG CCGACGGGAT GAAGGACGGG
AACCTGGACG GGCTGGTGTG GTCCGGGGGG CTGCCCACCG CGCAGATCAC CGACATCACC
ACCTCGCTCG GCGACCGGGT GAAGGTGCTC GACGTCACCG ACCTGCTGGA CGAGCTGAAG
CAGGTCAGCC CGGTGTACGA CCGGGGGGTC ATCCCGGCGG CCACGTACAA GCAGCCCGCC
GACGTCGGCG CGGTGGTCGT GCCGAACGTG CTGCTGGTCC GCGAGGACTT CCCGAGGGGC
GACGCGTGCG CCCTCACCGA GTTGATCTTC TCGGGGAAGC CGCAGCTGGA AGCCGCCCAC
CCGGCGGCCC GCGGCATCGA CCGCGCTCTC GCCGCGCAGA CGGACCCGGT GCCGCTGCAC
CCCGGATCGC GGGACGCACT GGGCGGGTGA
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| Protein sequence | MRSWVVRAAV GVLAVGLLAS GCGGKRTPTG GASGETGACE ASAGRITIAT GNSGGVYYVV
GGALAKLVSD STPLKATAAE TGASVQNVKQ LVAGDYDVAF SLADTAADAV RGTGGFEGQP
QKVSALTRLY PNYTQVLVRA DSGISSIADM RGKRISTGSP GSGTEVIAHR LLEAAGLDPD
ADVQAQRLDL AKTADGMKDG NLDGLVWSGG LPTAQITDIT TSLGDRVKVL DVTDLLDELK
QVSPVYDRGV IPAATYKQPA DVGAVVVPNV LLVREDFPRG DACALTELIF SGKPQLEAAH
PAARGIDRAL AAQTDPVPLH PGSRDALGG
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