| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6859 |
|---|
| Symbol | |
|---|
| ID | 8331079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7995633 |
|---|
| End bp | 7997210 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644947291 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_003104501 |
|---|
| Protein GI | 256380841 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCCCG ACATCGTCGC TAGGGAGCAC TCGGTGGTCA CCGACCAGTC AGCAACCGGC
CGCACCGAAC CCGACCACCC CGATCGAGAA CCCCGCGAGG AATGCGGTGT CTTCGGCGTG
TGGGCGCCGG GTGAGGAAGT CTCCAAGCTC ACTTACTACG GCCTCTACGC GCTCCAGCAC
CGCGGCCAGG AGGCCGCGGG CATCTCGGTC GGCGACGGGT CCCAGGTCGT GGTCTTCAAG
GACCTCGGCC TGGTCTCCCA GGTGTTCGAC GAGCAGGTGC TCTCCTCGCT GCGCGGCCAC
GTCGCCGTCG GCCACTGCCG CTACTCCACC ACGGGCTCCA CGACGTGGGA GAACGCGCAG
CCGACGTTCC GGCACACCGC GACCGGCTCG GCCCTCTCGC TCGGCCACAA CGGCAACCTG
GTCAACACCG CCGAGCTGCG CGAGCGGGCC GTCGCCGCCG GCCTCGACAC CGGTCACGGC
GCGACCACCG ACTCCGACCT GGTGTGCGGC CTGCTCGCCG CCGACGCCGC CGACCTGGGC
ATCGAGCAGT CGGCCATGAA GCTGCTGCCG ACCCTGCGCG GCGCGTTCTG CCTGGTCTTC
TCGGACGAGT CGACGCTGTA CGCGGCCCGC GACTCGCACG GCGTGCACCC GCTCGTCCTC
GGCCGCCTTG AGCGCGGCTG GGTCGTGGCC AGCGAGACCG CCGCGCTCGA CATCGTCGGC
GCCTCGTACG TCCGCGAGGT CGAGCCCGGC GAGCTGATCG CCATCGACGA GAACGGCCTG
CGGTCCAGCC GGTTCGCCAA CCCCGAGCCC AAGGGCTGCA TCTTCGAGTA CGTGTACCTG
GCCCGCCCGG ACACCTCGAT CGCCGGGCGC GGCGTGCACG CCACCCGCGT CGAGATCGGC
CGCAGGCTCG CCAAGGAGCA CCCGGTCGAG GCCGACCTGG TCATCCCGGT GCCCGAGTCC
GGCACGCCCG CCGCCATCGG CTACGCCCAG GCCTCCGGCA TCCCCTACGG GTCCGGCCTG
GTCAAGAACG CCTACGTCGG CCGCACGTTC ATCCAGCCGT CGCAGACCAT CCGCCAGCTC
GGCATCCGGC TCAAGCTCAA CCCGCTGCGC GACGTCATCC GCGGCAAGCG CCTGGTCGTC
GTGGACGACT CGATCGTGCG CGGCAACACC CAGCGCGCGC TCGTGCGGAT GCTCCGCGAG
GCCGGCGCGC TGGAGGTGCA CGTCCGGATC GCGTCGCCGC CCGTGAAGTG GCCGTGCTTC
TACGGCATCG ACTTCGCCTC GCGCGCCGAG CTGATCGCGA ACGGCCTCGA CGACGACGGC
ATCCGCCGCT CGATCGGCTC GGACTCGCTC GGCTACGTCT CGCTGGAGGA GCTCGTCTCG
GCCACCGAGC AGCCCAAGTC GCGGCTGTGC GCGGCCTGCT TCGACGGCGA GTACCCGATC
CCCCTGCCCG AGGACGCGCT CATCGGCAAG CACCTGCTCG AAGGCGTTCG CGGGGACGGC
GGTCGCGGCG TCGCGGGCTC GGCGACCCCG GTCCTGCCGA ACGGGTACGG TGCCGAGGAC
GCCCTCCAGA GGCCCTGA
|
|---|
| Protein sequence | MQPDIVAREH SVVTDQSATG RTEPDHPDRE PREECGVFGV WAPGEEVSKL TYYGLYALQH
RGQEAAGISV GDGSQVVVFK DLGLVSQVFD EQVLSSLRGH VAVGHCRYST TGSTTWENAQ
PTFRHTATGS ALSLGHNGNL VNTAELRERA VAAGLDTGHG ATTDSDLVCG LLAADAADLG
IEQSAMKLLP TLRGAFCLVF SDESTLYAAR DSHGVHPLVL GRLERGWVVA SETAALDIVG
ASYVREVEPG ELIAIDENGL RSSRFANPEP KGCIFEYVYL ARPDTSIAGR GVHATRVEIG
RRLAKEHPVE ADLVIPVPES GTPAAIGYAQ ASGIPYGSGL VKNAYVGRTF IQPSQTIRQL
GIRLKLNPLR DVIRGKRLVV VDDSIVRGNT QRALVRMLRE AGALEVHVRI ASPPVKWPCF
YGIDFASRAE LIANGLDDDG IRRSIGSDSL GYVSLEELVS ATEQPKSRLC AACFDGEYPI
PLPEDALIGK HLLEGVRGDG GRGVAGSATP VLPNGYGAED ALQRP
|
|---|
| |