Gene Amir_6798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6798 
Symbol 
ID8331017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7931636 
End bp7933855 
Gene Length2220 bp 
Protein Length739 aa 
Translation table11 
GC content75% 
IMG OID644947229 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_003104440 
Protein GI256380780 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase
[TIGR01511] copper-(or silver)-translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTG CGGAGACCGG GACCAGCAGG GTCGAGCTGG CGATCACCGG CATGACCTGC 
GCGTCGTGCG CGAACCGGAT CGAGCGCAAG CTCAACAAGC TCGACGGGGT GACCGCCTCG
GTCAACTACG CCACGGAGAA GGCGAGCGTC GAGTACCCGG ACGGCACGGA CGTGGCGGAC
CTGGTCTCCA CGGTCGAGGC GGCCGGTTAC GGAGCGCAAG CACCGCAACA GGACCGCGCC
CCCGAGCCGG AGGAGGACGA CCACGCGGGC GACCTCCGGC TGCGGGTGCG GCTCGCCGCG
CTGCTCGGCG TGCCGGTCAT CGTGCTCTCG ATGGTCCCGG CCTGGCAGTT CCCCGCCTGG
CAGTGGCTCT CGTTCGCGCT GGCCACCACC GTGGTGTGGG TGTGCGGCTG GCCATTCCAC
CGCGCCGCGG CGGTCAACCT GCGGCACGGG GCCAGCACGA TGGACACCCT GGTGTCGATG
GGCGTCACGG TGTCCTACCT GTGGTCCGCC TACGCCCTGG TGCTCGGCGG CGCGGGCGAG
CTGGGCATGA CGCACGGGTT CAGCCTGGTG CCGCGCCCGT CGTCGACCGG TGACGTCTAC
CTGGAGGTGG CCGTCGGCGT GACGCTGTTC CTGCTGCTCG GCCGCTGGCT GGAGGCCAGG
TCGAAGCGGC GGGCGGGGGC CGCGCTGCGG GCGCTGCTGG CGCTGGGCGC GAAGGACGTG
GCGGTGCTGC GGGACGGCCG CGAGGTGCGG GTCCCGGTGT CCGAGCTGCG GGTTGGCGAC
CGGTTCGCGG TGCGGCCGGG CGAGCGGATC GCGACGGACG GGGTCGTGGC CGAGGGCGCG
TCGGCGGTGG ACCGGTCGAT GGTCACCGGC GAGTCGGCGC CCGAGGAGGT CGGGGTCGGC
GACCGGGTGG TCGGCGGGTC GGTCAACGCG GGCGGCCTGC TGGTGGTCGA GGCGACCGGG
GTCGGTGAGG ACACCCAGCT GGCCAGGATG GCGGCGCTGG TCGAGCAGGC GCAGTCGGGC
AAGGCCGAGG TGCAGCGGCT GGCGGACCGG GTGTCGGCGG TGTTCGTGCC GGTGGTGCTG
GGCATCGCGC TGGTGACGCT GGTCGGGTGG CTGCTGTCCG GGGCCCCGGT GCAGTTCGCG
ATGACGGCGA CGGTGGCGGT GCTGGTGATC GCGTGCCCGT GCGCGCTGGG GCTGGCGACG
CCGACCGCGC TGCTGGTGGG CACCGGGCGG GGCGCGCAGC TGGGCATCCT GGTCAAGGGG
CCCGAGGTGC TGGAGTCGAC CCGGCGGGTG GACACGGTGG TGCTGGACAA GACCGGCACG
GTGACGACCG GGCGGCCGGA GCTGGTGGAC GTGGTGCCCG CGCCGGGCGT GGAGCGGGCG
GAGCTGCTGC GGGTGGCGGG CGCGGCCGAG CACGGCTCGG AGCACCCGAT CGCGGCGGCG
GTGGTGCGCG GGGCCGGGGC CGAGGTCGGC GAGCTGCCGC CGGTGACCGG GTTCGCGAAC
GAGGTGGGCG TCGGGGTGTC GGCGGTGCTG GAGGGCAGGC GGGTCGAGGT CGGCCGGTTG
ACGTCGGCGC GGCTGCCCGA GGAGCTGGTG GCGGCCGGGC GGGAGCTGGA GGGCCGGGGC
CGCACGGTGG TGGCGGTGAC CGCGAACGGG CTGCCGCTGG GGTTGCTGGG CGTGACCGAC
GCGGTGAAGC CGACCAGCGC GGAGGCGGTG CGCGGGCTGC GCGACCTGGG GTTGCGGCCG
GTGCTGCTGA CCGGGGACAA CGAGGTGGTG GCGCGCGCGG TGGCCGCCGA GGTGGGCGTC
GACGAGGTGA TCGCCGGGGT GCTGCCCTCG GGCAAGGTCG ACGCGGTGCG ACGGTTGCAG
GAGCAGGGCC GGGTGGTCGC GATGATCGGC GACGGGGTGA ACGACGCGCC CGCGCTGGCG
GCGGCGGACC TGGGGCTGGC GATGGGCACC GGCGCGGACG CGGCCATCGA GGCGGGCGAC
CTGACGCTGG TGCGCGGCGA CCTGCGGGTC GCGGTGGACG CCATCCGGTT GTCCCGGCGA
ACGCTGCGGA CCATCAAGGG AAATCTTTTC TGGGCGTTCG CCTACAACGT CGCCGGTTTG
CCGATCGCGG CGCTCGGATT GCTGAACCCC ATGCTCGCGG GGGCCGTGAT GGCCTTCTCC
AGCCTGTTCG TGGTCTCCAA CAGCCTGCGC CTGCGCGGGT TCCGCTCGAC CGCGGGCTGA
 
Protein sequence
MTTAETGTSR VELAITGMTC ASCANRIERK LNKLDGVTAS VNYATEKASV EYPDGTDVAD 
LVSTVEAAGY GAQAPQQDRA PEPEEDDHAG DLRLRVRLAA LLGVPVIVLS MVPAWQFPAW
QWLSFALATT VVWVCGWPFH RAAAVNLRHG ASTMDTLVSM GVTVSYLWSA YALVLGGAGE
LGMTHGFSLV PRPSSTGDVY LEVAVGVTLF LLLGRWLEAR SKRRAGAALR ALLALGAKDV
AVLRDGREVR VPVSELRVGD RFAVRPGERI ATDGVVAEGA SAVDRSMVTG ESAPEEVGVG
DRVVGGSVNA GGLLVVEATG VGEDTQLARM AALVEQAQSG KAEVQRLADR VSAVFVPVVL
GIALVTLVGW LLSGAPVQFA MTATVAVLVI ACPCALGLAT PTALLVGTGR GAQLGILVKG
PEVLESTRRV DTVVLDKTGT VTTGRPELVD VVPAPGVERA ELLRVAGAAE HGSEHPIAAA
VVRGAGAEVG ELPPVTGFAN EVGVGVSAVL EGRRVEVGRL TSARLPEELV AAGRELEGRG
RTVVAVTANG LPLGLLGVTD AVKPTSAEAV RGLRDLGLRP VLLTGDNEVV ARAVAAEVGV
DEVIAGVLPS GKVDAVRRLQ EQGRVVAMIG DGVNDAPALA AADLGLAMGT GADAAIEAGD
LTLVRGDLRV AVDAIRLSRR TLRTIKGNLF WAFAYNVAGL PIAALGLLNP MLAGAVMAFS
SLFVVSNSLR LRGFRSTAG