Gene Amir_6791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6791 
Symbol 
ID8331007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7927386 
End bp7928015 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content73% 
IMG OID644947219 
Productprotein of unknown function DUF161 
Protein accessionYP_003104433 
Protein GI256380773 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.894738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCAG CCTTGACCCA GTTGCCCGTC TCAACGGCAC CCGTTCGCCG CCTGCCCCAG 
CTGCTCCTCG GCCTGTGGCT CTACGGCACG AGCATGGCCC TGCACATCCG CTCCACCCTG 
GGCCTCGACC CGTGGGACGT GCTGCACGAG GGCCTCGCGC AGCGCACCGG CCTGTCGTTC 
GGCACGATCA CGGCCCTGGT GGGCGTGCTG GTGATGCTGT GCTGGATCCC ACTGCGCCAG 
CGGCCGGGCG TGGGCACGCT GGCGAACATC GTGGTCATCG GGGTCGCGGT GGACGCCGGG 
CTGGCCGTGC TGCCCGAGCC GACCTCGCTT CCGTGGCGGG CGACGTTCCT CGGCCTCGGC 
ATCGTGCTCA ACGGCCTGGC CGCCGCCACC TACATCGGCG CCCGGCTCGG CCCCGGCCCG 
CGCGACGGCC TGACCACGGG TTTCTGCGCG CGGACCGGGA CCTCGCTGCG CCTGGTGCGC 
ACCACCGTGG AGATCGCGGT GCTGGGGATC GGCTGGCTGC TCGGCGGCAC GGTCGGCGTG 
GGCACCGTGC TGTACGCGCT GGCCATCGGC CCGCTCACCC AGGCGTTCCT GCCGCTGGTC 
ACGTACGTGG AGCGGCGACC AGCTTCCTGA
 
Protein sequence
MLAALTQLPV STAPVRRLPQ LLLGLWLYGT SMALHIRSTL GLDPWDVLHE GLAQRTGLSF 
GTITALVGVL VMLCWIPLRQ RPGVGTLANI VVIGVAVDAG LAVLPEPTSL PWRATFLGLG 
IVLNGLAAAT YIGARLGPGP RDGLTTGFCA RTGTSLRLVR TTVEIAVLGI GWLLGGTVGV 
GTVLYALAIG PLTQAFLPLV TYVERRPAS