Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6759 |
Symbol | |
ID | 8330975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7893534 |
End bp | 7894265 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644947188 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003104402 |
Protein GI | 256380742 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCGTC CTACCGCAGT AGTCACCGGA GCCAGCGCGG GAATCGGCGA AGCCACCGCG CGCAGGCTGG CCGCCGAGGG CTTCCACGTC GTGCTCGGCG CCCGGCGACT GGAACTGATC CAGAGTATCG CGGCTGAGGT GGACGGCACG GCGATCGAGC TGGACGTGAC GGACGCCGCG TCCGTCGCGG CCCTGGCCGA GGCCGTGCCC GAGGTCCGCG TGCTGGTCAA CAACGCGGGC GGCGCCCGCG GGCTGAGCAG CGTCGCCGAG GCCGACGAGG AGCAGTGGCG CTGGATGTGG GAGACCAACG TGCTCGGCAC GCTCCGGGTC ACCAAGGCGC TGCTGCCCAA GCTGATCGCC TCCGGCGACG GGCACGTCGT CACGGTGACC TCGATCGCCG CGTTCGAGGC CTACGACAAC GGCTCCGGCT ACACCTCGGC CAAGCACGCC CAGTCCGCCG TGCACCGCAC GCTGCGCGGC GAGCTGCTGG GCGAGCCGGT CCGGGTCACC GAGGTCCTGC CGGGCATGGT CGAGACGGAC TTCTCCGTCA ACCGGTTCGA CGGGGACGCC GAGCGCGCCG CCGCCGTCTA CCGGGGACTG ACCCCGCTGA CCGCCGACGA CGTGGCCGAC ACCATCGCGT TCGCGGTGAC CAGGCCCTCG CACGTCAACC TGGACACCAT CGTGCTCAAG CCCCGCGCCC AAGCGTCCGC GAGCCGAGCC CACCGGGCGT GA
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Protein sequence | MNRPTAVVTG ASAGIGEATA RRLAAEGFHV VLGARRLELI QSIAAEVDGT AIELDVTDAA SVAALAEAVP EVRVLVNNAG GARGLSSVAE ADEEQWRWMW ETNVLGTLRV TKALLPKLIA SGDGHVVTVT SIAAFEAYDN GSGYTSAKHA QSAVHRTLRG ELLGEPVRVT EVLPGMVETD FSVNRFDGDA ERAAAVYRGL TPLTADDVAD TIAFAVTRPS HVNLDTIVLK PRAQASASRA HRA
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