Gene Amir_6759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6759 
Symbol 
ID8330975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7893534 
End bp7894265 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID644947188 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003104402 
Protein GI256380742 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGTC CTACCGCAGT AGTCACCGGA GCCAGCGCGG GAATCGGCGA AGCCACCGCG 
CGCAGGCTGG CCGCCGAGGG CTTCCACGTC GTGCTCGGCG CCCGGCGACT GGAACTGATC
CAGAGTATCG CGGCTGAGGT GGACGGCACG GCGATCGAGC TGGACGTGAC GGACGCCGCG
TCCGTCGCGG CCCTGGCCGA GGCCGTGCCC GAGGTCCGCG TGCTGGTCAA CAACGCGGGC
GGCGCCCGCG GGCTGAGCAG CGTCGCCGAG GCCGACGAGG AGCAGTGGCG CTGGATGTGG
GAGACCAACG TGCTCGGCAC GCTCCGGGTC ACCAAGGCGC TGCTGCCCAA GCTGATCGCC
TCCGGCGACG GGCACGTCGT CACGGTGACC TCGATCGCCG CGTTCGAGGC CTACGACAAC
GGCTCCGGCT ACACCTCGGC CAAGCACGCC CAGTCCGCCG TGCACCGCAC GCTGCGCGGC
GAGCTGCTGG GCGAGCCGGT CCGGGTCACC GAGGTCCTGC CGGGCATGGT CGAGACGGAC
TTCTCCGTCA ACCGGTTCGA CGGGGACGCC GAGCGCGCCG CCGCCGTCTA CCGGGGACTG
ACCCCGCTGA CCGCCGACGA CGTGGCCGAC ACCATCGCGT TCGCGGTGAC CAGGCCCTCG
CACGTCAACC TGGACACCAT CGTGCTCAAG CCCCGCGCCC AAGCGTCCGC GAGCCGAGCC
CACCGGGCGT GA
 
Protein sequence
MNRPTAVVTG ASAGIGEATA RRLAAEGFHV VLGARRLELI QSIAAEVDGT AIELDVTDAA 
SVAALAEAVP EVRVLVNNAG GARGLSSVAE ADEEQWRWMW ETNVLGTLRV TKALLPKLIA
SGDGHVVTVT SIAAFEAYDN GSGYTSAKHA QSAVHRTLRG ELLGEPVRVT EVLPGMVETD
FSVNRFDGDA ERAAAVYRGL TPLTADDVAD TIAFAVTRPS HVNLDTIVLK PRAQASASRA
HRA