Gene Amir_6736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6736 
Symbol 
ID8330952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7869928 
End bp7870581 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID644947165 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003104379 
Protein GI256380719 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02952] RNA polymerase sigma-70 factor, TIGR02952 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGA GGACGCGCGA GAGCAGCGCG AGACCCCGCC GTGGTCTCCG CTCCCTGTGG 
GGCGGGGGCA GGCGGCCGAG CACTGGCGAG GACGTGGACG GCGACGCGCC GGACGAGCCG
TGGGCCCTGG TGCGCGCGGC GCAGGGCGGC GACAAGGAGG CGTTCGGCGC CCTGTACGAC
CGGTACGTCG ACGTGGTGTA CCGCTACGTC CTGTTCCGGA TCGGGGACCG GACGCTGGCC
GAGGACGTGA CCAGCGAGAC GTTCCTGCGC GCGCTGCGGA GCATCGGGTC GATCAGCTAC
CAGGGCCGCG ACGTGGGCGC CTGGTTCGTC ACGATCGCCA GGAACATCGT GTTCGACCAC
GTGAAGTCCA GCCGGTACCG GTTGGAGATC ACCACGGCCG AGCTCGCCGA CAACCGCGAG
GCGGCGGACG GGCCCGAGCA GGAGGTGCTG GCGCTGGCGA CGAGCGAGGA GCTGCTCCGC
TGCGTCCGCC AACTGGGCGA TGACCAGCGC GAGTGCATTA CCCTGCGCTT CATCCAGGGC
TTGTCCGTGG CCGAGACCGC GGCGAAGATG GGGCGCAACG AGGGTGCCGT CAAGGCCCTG
CAGCACCGCG CGGTGCGCCG GTTGGCCCAA CTGCTGCCAC AGTGGTTGCG GTGA
 
Protein sequence
MTARTRESSA RPRRGLRSLW GGGRRPSTGE DVDGDAPDEP WALVRAAQGG DKEAFGALYD 
RYVDVVYRYV LFRIGDRTLA EDVTSETFLR ALRSIGSISY QGRDVGAWFV TIARNIVFDH
VKSSRYRLEI TTAELADNRE AADGPEQEVL ALATSEELLR CVRQLGDDQR ECITLRFIQG
LSVAETAAKM GRNEGAVKAL QHRAVRRLAQ LLPQWLR