Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6736 |
Symbol | |
ID | 8330952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7869928 |
End bp | 7870581 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644947165 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003104379 |
Protein GI | 256380719 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02952] RNA polymerase sigma-70 factor, TIGR02952 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCGA GGACGCGCGA GAGCAGCGCG AGACCCCGCC GTGGTCTCCG CTCCCTGTGG GGCGGGGGCA GGCGGCCGAG CACTGGCGAG GACGTGGACG GCGACGCGCC GGACGAGCCG TGGGCCCTGG TGCGCGCGGC GCAGGGCGGC GACAAGGAGG CGTTCGGCGC CCTGTACGAC CGGTACGTCG ACGTGGTGTA CCGCTACGTC CTGTTCCGGA TCGGGGACCG GACGCTGGCC GAGGACGTGA CCAGCGAGAC GTTCCTGCGC GCGCTGCGGA GCATCGGGTC GATCAGCTAC CAGGGCCGCG ACGTGGGCGC CTGGTTCGTC ACGATCGCCA GGAACATCGT GTTCGACCAC GTGAAGTCCA GCCGGTACCG GTTGGAGATC ACCACGGCCG AGCTCGCCGA CAACCGCGAG GCGGCGGACG GGCCCGAGCA GGAGGTGCTG GCGCTGGCGA CGAGCGAGGA GCTGCTCCGC TGCGTCCGCC AACTGGGCGA TGACCAGCGC GAGTGCATTA CCCTGCGCTT CATCCAGGGC TTGTCCGTGG CCGAGACCGC GGCGAAGATG GGGCGCAACG AGGGTGCCGT CAAGGCCCTG CAGCACCGCG CGGTGCGCCG GTTGGCCCAA CTGCTGCCAC AGTGGTTGCG GTGA
|
Protein sequence | MTARTRESSA RPRRGLRSLW GGGRRPSTGE DVDGDAPDEP WALVRAAQGG DKEAFGALYD RYVDVVYRYV LFRIGDRTLA EDVTSETFLR ALRSIGSISY QGRDVGAWFV TIARNIVFDH VKSSRYRLEI TTAELADNRE AADGPEQEVL ALATSEELLR CVRQLGDDQR ECITLRFIQG LSVAETAAKM GRNEGAVKAL QHRAVRRLAQ LLPQWLR
|
| |