Gene Amir_6712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6712 
Symbol 
ID8330928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7846106 
End bp7847071 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content71% 
IMG OID644947141 
Productcytochrome c-type biogenesis protein CcsB 
Protein accessionYP_003104355 
Protein GI256380695 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR03144] cytochrome c-type biogenesis protein CcsB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCGA CCGCCATGGC GGACTACAGC GATTGGACCT ACGTCGCCGC GGTGGCGGTC 
TACGTCCTCG CCGCCATCCT CTACCTGTGC GAACAGGCTT TCGCCCGCAC CAGCCCCCAG 
GAGGAGCGGG CGCTGGTCGG CGCCACCGCC ACGCCCACCA CCACGCCCAC CGCGGGCGTC 
GGCGCGGACG GCGCGTGGAC CCCCGGCCGG GTCGTGGAGG AGCCCAGGCT CCCGCGCGCC 
GAGCGCCTGG GCCGCATGGG CGCCGCGCTG ACCGTGCTGG GCGCGCTGCT GCACCTGGCG 
TCCCTGGTCA CCCGCGGCCT GGCCACCGGC CGCGCCCCGT GGGGCAACAT GTACGAGTAC 
GGCTCCATGC TCACGCTGGC CGCCGTCGTC ACCTGGCTCG TGCTGATGCG CGCCTTCCCG 
GTGCGCAAGC TCGGCGGGAT CATCCTGACC CCCGTCGTGA TCATCATGTT CCTCGGCGGC 
ACCGTCCTCT ACACCGACGC CGCGCCGGTC GTGCCCGCCC TCCAGTCCTA CTGGCTGGTC 
ATCCACGTCT CGGTCATCTC GATCTCCAGC GGCGTGTTCT TCGTGCCGGG CGTCGCCAGC 
CTGCTCTACC TGATCAAGGC CGGGAACCCC GAGCGCTTCC CGAAGCTGCC CGACGGCGAC 
GTGCTCGACC GGATCGCCTA CCGCAGCACC GTCTTCGCGT TCCCCCTGTT CACCATCGGC 
ATCATCACCG GCGCGATCTG GGCCGAGGCC GCGTGGGGCC GGTTCTGGGG CTGGGACCCC 
AAGGAGACGG TGGCGTTCGT CTCCTGGGTG GTCTACGCGG CCTACCTGCA CGCCCGCGCC 
ACGGCAGGAT GGCGGGGCAG GCCCGCCGCG TGGATCAACA TGCTCGGGTT CGCGATGACC 
ATCTTCAACC TCTTCTTCGT CAACCTCGTG ACCACCGGGT TGCACTCGTA CGCGGGCGTC 
AACTGA
 
Protein sequence
MQATAMADYS DWTYVAAVAV YVLAAILYLC EQAFARTSPQ EERALVGATA TPTTTPTAGV 
GADGAWTPGR VVEEPRLPRA ERLGRMGAAL TVLGALLHLA SLVTRGLATG RAPWGNMYEY 
GSMLTLAAVV TWLVLMRAFP VRKLGGIILT PVVIIMFLGG TVLYTDAAPV VPALQSYWLV 
IHVSVISISS GVFFVPGVAS LLYLIKAGNP ERFPKLPDGD VLDRIAYRST VFAFPLFTIG 
IITGAIWAEA AWGRFWGWDP KETVAFVSWV VYAAYLHARA TAGWRGRPAA WINMLGFAMT 
IFNLFFVNLV TTGLHSYAGV N