| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6702 |
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| Symbol | |
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| ID | 8330918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7837843 |
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| End bp | 7839477 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644947131 |
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| Product | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_003104345 |
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| Protein GI | 256380685 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCCGT CCACCGCTCA GGCGAGGGTG CTCGTCGACG AACTCGTGCG CAACGGCGTC
CGGCACGTCG TGCTGAGCCC CGGATCGCGC AACGCCCCGC TGTCGTTCGC GCTGCACGAC
GCGGCGGTGG CCGGGCGGCT GGAGCTGCAC GTGCGGATCG ACGAGCGCAG CGCGGGCTTC
CTCGCGCTGG GCCTGGCCCT GGACGGCTCG CCGGTCGCGG TGACCTGCAC GTCCGGCACC
GCCGTGGCGA ACCTGCACCC GGCCGTGCTG GAGGCAGCGC ACTCGGGCGT CCCGCTGATC
GCGCTGACCG CCGACCGGCC CGTGGAGCTG CACCGGGCGG GCGCGAGCCA GACCGTGCGG
CAGGACGGGG CGCTGGGCCT GGAGACGCTG CACCTGCCGG TGGCCGAGCG GCGGGCCGGG
CAGAACGCGC TGTGGCGCTC GCTGGTGTGC CGGGCGGTCG CGGCGGCGCG GGACGGCGGT
CCGGTGCACC TGAACGTGCC GTTCCGCGAG CCGCTGACGC CCGAGGGCGG CGACTGGGTG
GAGCCCCTGG AGGGCCGCCC GTTCGACCAG CCGTGGACCC GGACCGCGTC GCGCCGCGTG
GACGCCCCGC ACCCGGCCGA CCACCTGGGG CCGCGCACGC TGGTGATCCT GGGTGACGCA
GGCGCGACCG ACGGGGAGGC GGTGTGCGAC CTGGCGGCCC GCGCGGGCTG GCCGGTCATC
GCCGAGCCGA CCGCGTCCGG CCGCACCGTG CAGCACGGGT CGCTGCTGCT GAACGCCGGT
CCGCTGGCCG AGCGGCTGCG CCCGGACGCG GTCGTGGTGC TGGGGCGGGC GACGCTGTCC
AGGGGCGTGC AGGCGCTGCT GGGGTCGACG TCGGTGGTGC ACGTGGTCAC GGCCTCGGCG
GACTGGCCGG ACCCGAAGTT CTCCGCCACG CACGTGTCGG CCTCGCTCGC GCCGGGCGCG
CACGAGGTGG ACGACGACTG GCTGACCGCG TGGCGGCACG CCGACAAGGC GGCGGGCGAG
GCGGTGGCCG CGCTGCTGGC GGACGAGCCG TGGCCGACCG GGATGCACGT GGCGCGCGCG
GTGGTCGAGG CGCTGCCGCC GGGGTCGGCG CTGTTCCTGG GCTCCTCGAA CCCGGTGCGG
GACGTGGACT TCGCCGCGCC GCCGCGCCCG GACGTGGTGG TGCGCGCCAA CCGGGGCGTC
GCGGGCATCG ACGGGAGCGT GTCGACGGCG ATCGGGCTGG CCCTGGAGTG CGGGCCGACG
ACGGCGCTGA TGGGCGACCT GACGTTCCTG CACGACTCGA ACGGCCTGCT GATCGGCCCG
CACGAGCGGC GGCCGGACCT GACCGTGGTG GTGCTCAACG ACGACGGCGG CGGCATCTTC
GCGCTGCTGG AGCAGGGCGC GCCGGAGCAC GCGGACAGCT TCGAGCGGGT CTTCGGCACG
CCGCACGGCA CCGACCTGGC GGCGCTGTGC GCGGCGCACG GGGTGCCGCA CGTGCTCGCC
GGGTCGGCCG AGGAGCTGCG GGCGGAGATC ACCCGTCCGA GCGGGATCCG GGTCGTGGAG
GTCCGGGCCG AGCGGGCCGG TCTGCGCGAA CTGCACAAAA GGGTGAAAAC CGCGGTGTCA
AGCGCGGTCC AGTAG
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| Protein sequence | MNPSTAQARV LVDELVRNGV RHVVLSPGSR NAPLSFALHD AAVAGRLELH VRIDERSAGF
LALGLALDGS PVAVTCTSGT AVANLHPAVL EAAHSGVPLI ALTADRPVEL HRAGASQTVR
QDGALGLETL HLPVAERRAG QNALWRSLVC RAVAAARDGG PVHLNVPFRE PLTPEGGDWV
EPLEGRPFDQ PWTRTASRRV DAPHPADHLG PRTLVILGDA GATDGEAVCD LAARAGWPVI
AEPTASGRTV QHGSLLLNAG PLAERLRPDA VVVLGRATLS RGVQALLGST SVVHVVTASA
DWPDPKFSAT HVSASLAPGA HEVDDDWLTA WRHADKAAGE AVAALLADEP WPTGMHVARA
VVEALPPGSA LFLGSSNPVR DVDFAAPPRP DVVVRANRGV AGIDGSVSTA IGLALECGPT
TALMGDLTFL HDSNGLLIGP HERRPDLTVV VLNDDGGGIF ALLEQGAPEH ADSFERVFGT
PHGTDLAALC AAHGVPHVLA GSAEELRAEI TRPSGIRVVE VRAERAGLRE LHKRVKTAVS
SAVQ
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