| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6683 |
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| Symbol | |
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| ID | 8330899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7820237 |
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| End bp | 7821517 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644947112 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_003104326 |
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| Protein GI | 256380666 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00871957 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTC CCAGCCGCCG CAGGGCGGAC GAGGACGCCG AAGTGATCGT GGTCGGCGCG
GGTCCCGCGG GCTCGACCGC CGCCACCTAC CTGGCGCGGG CAGGTCTCGA CGTGCTGCTC
CTGGAGAAGG GCAGCTTCCC CCGCGAGAAG GTCTGCGGGG ACGGGCTGAC CCCGCGCGGC
GTCAAGCAGC TGATCGACCT CGGCATCGAC ACCCGCGAGG AGGCGGGCTG GCTGCACAAC
AAGGGCCTGC GCGTGGTCGG CGGCGGGGTC ACCATGGAGC TGGCCTGGCC CGAGCTGGCC
TCGTTCCCGC CCTACGGCGT GGTGCGGCCC CGGCAGGACT TCGACGACAT GCTGGCCAAG
GCCGCCGTCG AGGCGGGGGC GCGGCTCAAG GAGAACAACA ACGTCACCGG CGCGGTCGTC
GAGCGCGGCC GGGTGGTGGG CGTGACGGCC AAGGTCGGCA AGGACAAGGA GCCGGTCACC
TACCGCGCGC CGCTGGTCCT GGCCTGCGAC GGCGTGTCCG CGCGTCTGGC GCTGTCGGTG
GGCCTGCAGA AGGACGACGC GAAGCCGATG GGCGTCGCGG TGCGCCGCTA CTACGCGAGC
CCCCGCACCA AGGACGACCA CCTGGAGTCG CACCTGGAGC TGTGGGACCG CAAGAACAAC
GTGCTGCTCC CCGGCTACGG CTGGATCTTC GGGATGGGCG ACGGCACGGT CAACGTCGGC
CTGGGCATCC TGAGCACCTC CAAGGCGTAC GGCACCACGG ACTACCGCGC GCTGCTCAAG
TCCTGGCTGG ACGGCACCCC CGAGGAGTGG GGCTTCCGCG AGGAGAACGC CACCAGCCGC
ATCGGCGGCG CCGCCCTGCC CATGGGCCTG AACCGCAAGC CGCACTACAG CAACGGGCTG
CTGCTGGTCG GCGACGCCGG CGGCATGGTC AACCCGTTCA ACGGCGAGGG CATCGGCTAC
GCCATGGAGT CCGCCAAGAT CGCCGCGGAG ACCGTCGTGC AGGCCATGGC CAGGCCGGAC
GGCCCCAGCC GGGAGCGCGC GCTGCACGGC TACCCGGTGC GCATCGAGCA GGCGCTGGGC
AGCTACTACC GGCTCGGGAA CATCTTCAGC AAGCTCATCG GCAACCCCAC GATCATGAGC
ACCGCGACCA AGTACGGACT TCCGCGCAAG GGCCTTATGA AACTTGTGCT GAAGCTGCTC
GCTGGGCTAT ACGACCCGAA GGACGGGGAC GCTTTCGACC GCGTCATCAC GGCGGCGACG
AAGATGGCTC CAACGGCTTA A
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| Protein sequence | MTTPSRRRAD EDAEVIVVGA GPAGSTAATY LARAGLDVLL LEKGSFPREK VCGDGLTPRG
VKQLIDLGID TREEAGWLHN KGLRVVGGGV TMELAWPELA SFPPYGVVRP RQDFDDMLAK
AAVEAGARLK ENNNVTGAVV ERGRVVGVTA KVGKDKEPVT YRAPLVLACD GVSARLALSV
GLQKDDAKPM GVAVRRYYAS PRTKDDHLES HLELWDRKNN VLLPGYGWIF GMGDGTVNVG
LGILSTSKAY GTTDYRALLK SWLDGTPEEW GFREENATSR IGGAALPMGL NRKPHYSNGL
LLVGDAGGMV NPFNGEGIGY AMESAKIAAE TVVQAMARPD GPSRERALHG YPVRIEQALG
SYYRLGNIFS KLIGNPTIMS TATKYGLPRK GLMKLVLKLL AGLYDPKDGD AFDRVITAAT
KMAPTA
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