Gene Amir_6653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6653 
Symbol 
ID8330869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7787680 
End bp7788171 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID644947082 
Productputative nucleotide-binding protein 
Protein accessionYP_003104296 
Protein GI256380636 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.59339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGACC CGTCGTTCGA CGTGGTGAGC AAGGTCGACC GCCAGGAGGT CGACAACGCG 
CTCAACCAGG CGGCCAAGGA GTTGAGCAAC CGGTTCGACT TCCGCGGCAC CGGCACCGAG 
GTGTCGTGGG CGGGCGAGGA GGCGATCGCC TTCCAGTCCG AGACCGAGGA GCGCTGCCGG 
GCCGCGATCG AGGTGTTCCA GGAGAAGCTC ATCAAGCGCG GCATCTCCAT GAAGGCCTTC 
GAGATCGGCG ACCCCGCCGT GTCCGGCAAG GTGTTCAAGG TCACGGGCAC GCTCGTGCAG 
GGCATCACCT CCGAGAAGGC CAAGGAGATC GCCAAGCGCA TCCGGGACGA GGCTCCCAAG 
GGCGTGCAGG CGCAGATCCA GGGCGACCAG CTGCGGGTGT CCGGCAAGAA GAAGGACCAC 
CTGCAGGAGG TGATCGCGCT GCTCAAGGGC GCGGACTTCG GGATCGCCCT CCAGTTCACC 
AACTACCGGT GA
 
Protein sequence
MADPSFDVVS KVDRQEVDNA LNQAAKELSN RFDFRGTGTE VSWAGEEAIA FQSETEERCR 
AAIEVFQEKL IKRGISMKAF EIGDPAVSGK VFKVTGTLVQ GITSEKAKEI AKRIRDEAPK 
GVQAQIQGDQ LRVSGKKKDH LQEVIALLKG ADFGIALQFT NYR