Gene Amir_6643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6643 
Symbol 
ID8330856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7777575 
End bp7778816 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content73% 
IMG OID644947069 
Productaspartate aminotransferase 
Protein accessionYP_003104286 
Protein GI256380626 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGC CTGAGACGAC CCCCGCGCCC ACCGCCCCCG CGCTCCCCCG GATCTCCCGG 
CGGATCGGGG GCATCGCCGA GTCCGCCACG CTGGCGGTCG ACGCGAAGGC GAAGGCGCTC
AAGGCGGCGG GGCGACCGGT GATCGGGTTC GGGGCGGGCG AGCCCGACTT CCCGACGCCG
GAGGCGGTCG TGGCCGCCGC CCAGGCCGCG TGCGCCGACC CGCGCAACCA CCGCTACACC
CCGGCCGCGG GCCTGCCCGA GCTGCGTGAG GCCGTCGCCG CGAAGACCAA GCGCGACTCC
GGCTACGAGG TGGCCGCGAG CCAGGTGCTG ATCACCAACG GCGGCAAGCA GGCCGTCTAC
CAGGCGTTCG CGACCATCGT CGACCCCGGC GACGAGGTGC TGCTGCCCGC GCCGTACTGG
ACCACCTACC CCGAGGCGAT CACCCTCGCG GGCGGCGTCC CGGTGCAGGT CACGGCGGAC
GAGACCACCG ACTACCTGGT GACCGTCGAG CAGCTGGAGG CGGCCCGCAC GCCGCGCACG
AAGGTGCTGC TGCTGTGCTC GCCGTCCAAC CCGACCGGCT CGGTCTACAG CCGCGAGGCG
ATCACCGAGA TCGGCCGCTG GGCGCACGCC AACGGCCTGT GGGTGATCAG CGACGAGATC
TACGAGCACC TGGTCTACGA CGGCGCCGAG GCGGTCTCGC TGCCGGTGGC CGTCCCGGAG
ATGGCCGACC GCACGATCGT GCTCAACGGC GTGGCCAAGA CGTACGCGAT GACCGGCTGG
CGGGTCGGCT GGCTGATCGG CCCGGCCGAC GTGGTCAAGG CCGCCGCGAA CCTCCAGTCG
CACCTGTCCT CGAACGTGTC GAACGTCGCA CAGCGCGCCG CGCTGGAGGC CGTGTCCGGC
TCGCTGGACG CCGCGCACGC GATGCGCGTC GCGTTCGACC GCAGGCGTCG CCTGATCGTG
GAGCTGCTGT CCGCGATCCC CGGCGTGGAC TGCCCCAACC CGACCGGCGC GTTCTACGTC
TACCCGTCGG TGAGGGCGCT GATCGGCAAG GAGCTGCGGG GCCAGGAGAT CACCGACTCG
GTGACGCTGG CCGCGCTGAT CCTGGAGCAC GCCGAGGTCG CCGTGGTCCC CGGCGAGGCG
TTCGGCACCC CCGGCTACCT GCGCCTGTCC TACGCGCTCG GCGACGAGGA CCTCAAGACC
GGTCTCGACC GCGTGGCGAA GCTGCTCGCC GAGGTGAAGT AG
 
Protein sequence
MAEPETTPAP TAPALPRISR RIGGIAESAT LAVDAKAKAL KAAGRPVIGF GAGEPDFPTP 
EAVVAAAQAA CADPRNHRYT PAAGLPELRE AVAAKTKRDS GYEVAASQVL ITNGGKQAVY
QAFATIVDPG DEVLLPAPYW TTYPEAITLA GGVPVQVTAD ETTDYLVTVE QLEAARTPRT
KVLLLCSPSN PTGSVYSREA ITEIGRWAHA NGLWVISDEI YEHLVYDGAE AVSLPVAVPE
MADRTIVLNG VAKTYAMTGW RVGWLIGPAD VVKAAANLQS HLSSNVSNVA QRAALEAVSG
SLDAAHAMRV AFDRRRRLIV ELLSAIPGVD CPNPTGAFYV YPSVRALIGK ELRGQEITDS
VTLAALILEH AEVAVVPGEA FGTPGYLRLS YALGDEDLKT GLDRVAKLLA EVK