Gene Amir_6613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6613 
Symbol 
ID8330825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7745941 
End bp7746636 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID644947039 
Productribosomal protein L4/L1e 
Protein accessionYP_003104257 
Protein GI256380597 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGT CCGTTGAGGT CCGCACCCCG GACGGCAAGA CCGACGGCAG CGTCGAGCTG 
CCCGGCGCCG TGTTCGACGC GCAGGCCAAC ATCTCCCTGC TGCACCAGGT CGTCGTGGCC
CAGCAGGCCG CCGCGCGCCA GGGCACGCAC AAGGTGAAGA CCCGCGCCGA GGTCTCCGGT
GGCGGCAAGA AGCCGTACCG GCAGAAGGGC ACCGGCCGCG CCCGTCAGGG CTCGACCCGC
GCGCCCCAGT TCGCCGGTGG TGGCGTCGTG CACGGTCCCG TGCCGCGCGA CTACTCGCAG
CGCACCCCCA AGAAGATGAA GGCCGCCGCC CTGCGCGGTG CCCTGTCCGA CCGGGCCCGC
GCGAACCAGG TCCACGTGGT GACCGGTTTC GTGGAGGGTG ACAAGCCCTC CACCAAGACC
GCCCGCAAGG TCCTGGAGTC GGTGAGCACC GCCCGCCGCA TCCTGGTCGT GCTGCTGCGC
GACGAGGACG TGTCGTGGGT GAGCCTGCGC AACCTGACGC ACGTGCACGT CATCGCGCCC
GACCAGCTCA ACACGTACGA CGTGCTGGTC AACGACGACG TGGTGTTCAG CAAGAGCGCC
CTGGACGTGT TCCTCGCGAG CAAGTCCCAG CAGGGCAAGG GCTCGGCCGA GGCGGTCGCC
GGTTCGTCCG AGGTGGCACA GGAGGACGAG AAGTGA
 
Protein sequence
MTTSVEVRTP DGKTDGSVEL PGAVFDAQAN ISLLHQVVVA QQAAARQGTH KVKTRAEVSG 
GGKKPYRQKG TGRARQGSTR APQFAGGGVV HGPVPRDYSQ RTPKKMKAAA LRGALSDRAR
ANQVHVVTGF VEGDKPSTKT ARKVLESVST ARRILVVLLR DEDVSWVSLR NLTHVHVIAP
DQLNTYDVLV NDDVVFSKSA LDVFLASKSQ QGKGSAEAVA GSSEVAQEDE K