Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6613 |
Symbol | |
ID | 8330825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7745941 |
End bp | 7746636 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644947039 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_003104257 |
Protein GI | 256380597 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGT CCGTTGAGGT CCGCACCCCG GACGGCAAGA CCGACGGCAG CGTCGAGCTG CCCGGCGCCG TGTTCGACGC GCAGGCCAAC ATCTCCCTGC TGCACCAGGT CGTCGTGGCC CAGCAGGCCG CCGCGCGCCA GGGCACGCAC AAGGTGAAGA CCCGCGCCGA GGTCTCCGGT GGCGGCAAGA AGCCGTACCG GCAGAAGGGC ACCGGCCGCG CCCGTCAGGG CTCGACCCGC GCGCCCCAGT TCGCCGGTGG TGGCGTCGTG CACGGTCCCG TGCCGCGCGA CTACTCGCAG CGCACCCCCA AGAAGATGAA GGCCGCCGCC CTGCGCGGTG CCCTGTCCGA CCGGGCCCGC GCGAACCAGG TCCACGTGGT GACCGGTTTC GTGGAGGGTG ACAAGCCCTC CACCAAGACC GCCCGCAAGG TCCTGGAGTC GGTGAGCACC GCCCGCCGCA TCCTGGTCGT GCTGCTGCGC GACGAGGACG TGTCGTGGGT GAGCCTGCGC AACCTGACGC ACGTGCACGT CATCGCGCCC GACCAGCTCA ACACGTACGA CGTGCTGGTC AACGACGACG TGGTGTTCAG CAAGAGCGCC CTGGACGTGT TCCTCGCGAG CAAGTCCCAG CAGGGCAAGG GCTCGGCCGA GGCGGTCGCC GGTTCGTCCG AGGTGGCACA GGAGGACGAG AAGTGA
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Protein sequence | MTTSVEVRTP DGKTDGSVEL PGAVFDAQAN ISLLHQVVVA QQAAARQGTH KVKTRAEVSG GGKKPYRQKG TGRARQGSTR APQFAGGGVV HGPVPRDYSQ RTPKKMKAAA LRGALSDRAR ANQVHVVTGF VEGDKPSTKT ARKVLESVST ARRILVVLLR DEDVSWVSLR NLTHVHVIAP DQLNTYDVLV NDDVVFSKSA LDVFLASKSQ QGKGSAEAVA GSSEVAQEDE K
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