Gene Amir_6565 details

Gene Information

• Locus tag: Amir_6565
• Symbol: rplM
• ID: 8330777
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 7707899
• End bp: 7708342
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644946992
• Product: 50S ribosomal protein L13
• Protein accession: YP_003104210
• Protein GI: 256380550
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.870556
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCACGT ACAGCCCGAA GCCCGGCGAG GTGACCCGCG CCTGGCACGT GATCGACGCC 
CAGGACCTGG TGCTCGGTCG GCTCGCCACC CAGGCCGCGA CGCTGCTGCG CGGCAAGCAC 
AAGCCGACCT ACGCCCCACA CGTTGACACC GGTGACTTCG TCATCGTCAT CAACGCCGAC 
AAGGTGGCGC TGACCGGCAA GAAGCGGGAG CAGGCCTTCG CCTACCGCCA CTCCGGCCAC 
CCCGGTGGTC TGAGCAAGCA GTCGTTCGGC GAGCTGCTCG ACACCCGCGC CGACCGCTTG 
GTCGAGAAGG CGATCAAGGG CATGCTGCCC AAGAACCGCC TCGGCCGCGC GATGGCCTCC 
AAGCTGAAGG TCTACACCGG CTCGGAGCAC CCGCACGCTG CGCAGCAGCC GCAGCCGTTC 
GAGATCAAGA AGGTCGCCCA GTGA 

 

Protein sequence

MRTYSPKPGE VTRAWHVIDA QDLVLGRLAT QAATLLRGKH KPTYAPHVDT GDFVIVINAD 
KVALTGKKRE QAFAYRHSGH PGGLSKQSFG ELLDTRADRL VEKAIKGMLP KNRLGRAMAS 
KLKVYTGSEH PHAAQQPQPF EIKKVAQ