| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6538 |
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| Symbol | |
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| ID | 8330750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7679771 |
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| End bp | 7680343 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644946966 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003104184 |
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| Protein GI | 256380524 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACT TGGGGGACGG ACTGGACGCC GAAGTGGGCG CAGCCGTCGA TGGCGACCGC
CACGCGATCG AGCGACTGCT GGCGTCGATC CGGCCCCTCG TGGTGCGGTA CTGCCGCGCC
CGTGTCGGCA GGCAGGAGAG GTCGTTCGCC TCGGCGGACG ACGTGGCCCA GGAGGTGTGT
CTCGCCGTGC TGACGGCGTT GCCCAGCTAT CGGGACCAGG GGCGGCCCTT CCTCGCGTTC
GTCTACGGGA TCGCCGCCCA CAAGGTGGCC GACGCGCACC GGTCGGCCGC CAGGAACCGG
TCCGAGCCGG TCCCCGAGGT CCCCGACGCC CCGGAGACGG AGGCGGGCCC CGAGCAGCGG
GCCATGCAGG GCGAGCTGTC GGGGCGGATG GCGCAACTGC TGAAGATCCT GCCGGAGAAG
CAGCGGGAGA TCCTGCTGCT TCGCGTGGTC GTCGGCCTGT CGGCCGAGGA GACCGCGACC
GCGGTCGGTT CCACGCCGGG CGCGGTACGG GTGGCGCAGC ACCGCGCCCT CGCACGCCTC
CGCAAAGCAC TCGCTGCGGA GGAGGTGGTC TGA
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| Protein sequence | MTNLGDGLDA EVGAAVDGDR HAIERLLASI RPLVVRYCRA RVGRQERSFA SADDVAQEVC
LAVLTALPSY RDQGRPFLAF VYGIAAHKVA DAHRSAARNR SEPVPEVPDA PETEAGPEQR
AMQGELSGRM AQLLKILPEK QREILLLRVV VGLSAEETAT AVGSTPGAVR VAQHRALARL
RKALAAEEVV
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