| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6532 |
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| Symbol | |
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| ID | 8330744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7673298 |
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| End bp | 7674986 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946960 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003104178 |
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| Protein GI | 256380518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.243842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAAC CCGGTGAGGG CGTCGACCAC GACGTCGTGG TGGTGGGGTC GGGGTTCGGC
GGCAGCGTCG CGGCGCTGCG GCTGACCGAG AAGGGGTACC GGGTCGCGGT CGTCGAGGCC
GGGCGGAGGT TCTCCGACGA CGAGTTCGCC GAGACCTCGT GGGATGTGCG GCGGTACCTG
TGGGCGCCCG CGCTCGGGTG CTACGGCATC CAGCGGGTGC ACGTCCTGCG GGACGTGGTG
GTGCTGGCCG GGGCCGGGGT CGGCGGTGGG TCGCTGGTGT ACGCGAACAC GCTGTACCGG
CCGCCCAGCG CGTTCTTCCT GGACCGGCAG TGGGCGCACA TCACCGACTG GGAGTCGGAG
CTCGCCCCGC ACTACGACCA GGCCAGCCGG GTGCTGGGGG TGGTGGCCAA CCCCGACCGC
ACGCCGAGCG ACGTGGTGCT GGAGCGGGTC GCGGAGCGGA TGGGGGTCCG GGACACCTAC
CGGCCCACGC CGGTGGGGGT GCACTTCGGG CGGCCGGGGG AGGTGGCCGC CGATCCGTAC
TTCGGCGGGG TGGGGCCTTC GCGGGCCGGG TGCACGCGGT GCGGGGCGTG CATGACCGGG
TGCCGCGTGG GGGCCAAGAA CACGCTGGTC AAGAACTACC TGCACCTCGC GGAGCTGGCG
GGCGCGCGGG TGCTGCCGAT GAGCACGGCG ACCGAGGTCC GGCCGCGGGG GGACGGGACC
TGGGCGGTGC GGATCAGGCG CACGGGTGGG CCGCGGTCGG CGGAGCGGGT GCTGACGGCG
GGGCAGGTGG TGCTGGCGGC CGGGGCGTGG GGGACGCAGC GGTTGCTGCA CCGGATGCGC
GACGACGGGG TGCTGCCGGG GCTGTCGCCG AGGTTGGGGG AGCTGACCAG GACGAACTCG
GAGGCGATCA CGGGGGCCGG GAGGTTCCGG GTCGACCCAG GGCGGGACTT CAGCGCCGGG
GTCGCGATCA CGTCCTCGAT GCACCCGGAC GCGGACACGC ACGTGGAGGC GGTGCGGTTC
GGGCGGGGGA GCAACCTGAT GGGGCTGTTG CAGACCCTGG CCACGGACGG GGGGAGTGCG
ACGCCCCGGT TCGCGCAGTT CCTGGCCGCG GTGGCGCGCG ACCCGGTGCG GGCGGTGAGG
TTGCTGTCCG TGCGGAGGTG GAGCGAGCGG ACGGTGATCT TGCTGGTGAT GCAGAGCCTG
GACAACTCGT TGACCACGTT CGGGAAGCGG GGGGTGTTCG GGCGGTGGAG GCTCGGGAGC
GGGCAGGGGC ACGGGGCGCC CAACCCGTCG TACATCGCGG CCGGGGCGCG GGCGGGCGAG
CTGGCCGCCG AGGAGATCGG CGGGGTTGCG GGCGGGGCGA TCGGGGAGCT GTTCGACGTG
CCGATGACGG CGCATTTCCT GGGCGGGTGC GCGATCGGGG AGGACTGGGG GAGTGGGGTG
GTGGACCCGT ATCTGAGGGT GCACGGGTAT CCGGGGCTGT CGGTGGTGGA TGGTGCGGCG
GTGTCGGCGA ACCTTGGGGT CAACCCGTCG TTGACGATCG CGGCTCAGGC TGAGCGGGCG
TTCTCGTTGT GGCCGAATGC GGGGGAGGCG GATACGCGGC CCGCGCAGGG GGAGGGGTAT
CGGAGGGTGC GGGTGGTGCG GCCTCGGGCT CCGGTTGTGC CGGAGGGGGC GGTGGGGGCG
TTGCGGTGA
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| Protein sequence | MAEPGEGVDH DVVVVGSGFG GSVAALRLTE KGYRVAVVEA GRRFSDDEFA ETSWDVRRYL
WAPALGCYGI QRVHVLRDVV VLAGAGVGGG SLVYANTLYR PPSAFFLDRQ WAHITDWESE
LAPHYDQASR VLGVVANPDR TPSDVVLERV AERMGVRDTY RPTPVGVHFG RPGEVAADPY
FGGVGPSRAG CTRCGACMTG CRVGAKNTLV KNYLHLAELA GARVLPMSTA TEVRPRGDGT
WAVRIRRTGG PRSAERVLTA GQVVLAAGAW GTQRLLHRMR DDGVLPGLSP RLGELTRTNS
EAITGAGRFR VDPGRDFSAG VAITSSMHPD ADTHVEAVRF GRGSNLMGLL QTLATDGGSA
TPRFAQFLAA VARDPVRAVR LLSVRRWSER TVILLVMQSL DNSLTTFGKR GVFGRWRLGS
GQGHGAPNPS YIAAGARAGE LAAEEIGGVA GGAIGELFDV PMTAHFLGGC AIGEDWGSGV
VDPYLRVHGY PGLSVVDGAA VSANLGVNPS LTIAAQAERA FSLWPNAGEA DTRPAQGEGY
RRVRVVRPRA PVVPEGAVGA LR
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