Gene Amir_6523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6523 
Symbol 
ID8330735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7663866 
End bp7664807 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content75% 
IMG OID644946951 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003104169 
Protein GI256380509 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACC CCGGCTCGCT GGTCAGGATG GGCGTGCTCG CCCTGGTGTG GGGCTCCAGC 
TTCCTGTGGA TCAAGGTCGC GCTGACCGGG CTGTCCCCGG TGCAGATCGC GCTGGCGCGG
ACCGCGCTCG GCGCGCTCAC CCTGGTGGCG GTGCTCCTGG CGAGCGGGCA GCGGCTGCCG
CGCGGGAAGG CGCTGTGGGG GCACCTGGCG GTGGCGGCGC TGTTCAACAA CACCGTGCCG
TTCGTGCTGT TCGCGGTCGG CGAGCAGAGC GTGGACTCGG GCGTGGCCGG GGTGCTCAAC
GCCACCACGC CGCTGTGGAC GCTGCTGCTG GGGCTGGCGC TGGGCACCGA GCGGGGCGGC
GGCCGGGCGC GGCTGGCCGG GCTGGCGCTG GGCTTCGCCG GGGTGCTGCT GATCTTCGCG
CCGTGGGAGC GGGGCGGGCT GGCCAGCTGG GGCGCGCTGG CGTGCCTGGT GGCGGCGGCC
TCGTACGCGG TGGCCTACAC CTACATCGGG CGGACGGTGT CCGGGCGCGG GGCCACCTCG
ATGCAGCTGT CCTCGGCGCA GCTGGTGGTG GGCAGCGGCC TGACCGCGCT CGCGCTGCCC
GCGGGCGGGC TGGAGACGCC GCACCTGTCC TGGGAGCCGC TGCTGGCGGT GGCCGTGCTG
GGCGTGCTGG GCACGGGCCT GGCGTTCCTG CTGAACTACC GGCTGATCGA GGACGAGGGC
CCGACGAACG CCACCGTGGT CGGCTACCTG CTGCCGGTGG TCTCGGTCCT GCTGGGCGCG
GTGTTCCTCG GGGAGGCGCT GAACCTGCGG GTCGTGGTGG GCATGGCCGT TGTTCTCGCA
GGGGTCGCCC TGACCCGCGC GCGCCGGGCC CCGAGGCCCC TCCCGGAGGT CCGGGAAGCG
GTCGCGGCGG CTGCCTCCGG GGAGCCGGCT ACGCTCAAGT GA
 
Protein sequence
MNNPGSLVRM GVLALVWGSS FLWIKVALTG LSPVQIALAR TALGALTLVA VLLASGQRLP 
RGKALWGHLA VAALFNNTVP FVLFAVGEQS VDSGVAGVLN ATTPLWTLLL GLALGTERGG
GRARLAGLAL GFAGVLLIFA PWERGGLASW GALACLVAAA SYAVAYTYIG RTVSGRGATS
MQLSSAQLVV GSGLTALALP AGGLETPHLS WEPLLAVAVL GVLGTGLAFL LNYRLIEDEG
PTNATVVGYL LPVVSVLLGA VFLGEALNLR VVVGMAVVLA GVALTRARRA PRPLPEVREA
VAAAASGEPA TLK