Gene Amir_6511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6511 
Symbol 
ID8330723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7650110 
End bp7650784 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content74% 
IMG OID644946939 
ProductPeptidase M23 
Protein accessionYP_003104157 
Protein GI256380497 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGCCG CCGTCGCGGT CGGCGCGTTC GCCGCCGCAG GCGCCGCGCA GACCGTGCAG 
GCGCTGGGTG GCCCCTCGCA GTCCGCCTCC GACGAGGTCA TGCCGCTGGC TGCCTCGGCG 
CCCGACGGCG CCGCCGCGTT CGGCGTCGGC GGCGACGAGG CCCCGGCCGC GCCGCAGATC 
ATCCCGGTCG CGAAGACGGT CGACGCCGCC TCCGAGGCGC AGAAGCTCGC CAAGAGCCAG 
CAGATCGTCG AGCAGCGCGA GGCCGCCGAG GCCGAGCGCC TGCGCCCCAA GTTCGTCTCC 
CCCGCCCAGG GCACCTTCAC CTCCGGGTAC GGCGGTCGCT GGGGCACCGT GCACTACGGC 
ATCGACATCG CGGGCCCCAC GGGCACCCCG ATCCTGTCCG CCGCCGACGG CACGATCCTG 
GAGGCGGGCA CCGCGAGCGG CTTCGGCCTG TGGGTGCGCG TGCTGCACGA CACCGGCGAG 
GTCACCGTCT ACGGCCACGT CGACAGCTAC AGCGTGTCCA AGGGCCAGCG GGTCAAGGCG 
GGCGAGCAGA TCGCGCGCAT GGGCAACCGC GGCGTCTCCA CCGGCACCCA CCTGCACTTC 
GAGGTCTGGG AGTCGGACGG CGGGCTCAAG CTGAACCCGC AGACCTGGCT CAACGCGCGC 
GGAATCGTGG TCTGA
 
Protein sequence
MVAAVAVGAF AAAGAAQTVQ ALGGPSQSAS DEVMPLAASA PDGAAAFGVG GDEAPAAPQI 
IPVAKTVDAA SEAQKLAKSQ QIVEQREAAE AERLRPKFVS PAQGTFTSGY GGRWGTVHYG 
IDIAGPTGTP ILSAADGTIL EAGTASGFGL WVRVLHDTGE VTVYGHVDSY SVSKGQRVKA 
GEQIARMGNR GVSTGTHLHF EVWESDGGLK LNPQTWLNAR GIVV