Gene Amir_6420 details

Gene Information

• Locus tag: Amir_6420
• ID: 8330631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 7517538
• End bp: 7519355
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644946848
• Product: serine/threonine protein kinase
• Protein accession: YP_003104067
• Protein GI: 256380407
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACAGTG AGCGCCTCAT CGCGGGCCGT TACCGCCTGC ACCACGTGCT GGGCAGCGGG 
TCGATGGGGA CCGTCTGGGC CGCGCACGAC GAGGTGCTGC GGCGCGCGGT CGCCGTGAAG 
GAAGTCTTCC AGCCGTCCGG GATGGCGGGC GGCGAGGCGG CGGTGCTGCG GGAGCGCACG 
CTGCGCGAGG CCCGCGCCGC AGCGCAGCTG GCCCACCCGA ACCTGGTGAC GATCTACGAC 
GTGGTGCAGG TCGACGGCGA CCCGTACGTG GTGATGGAGC TGGTGCCGTC CGAGTCGCTG 
GCGGAGGTGG TGCGCCGCTG CGGGCCGCTG ACCGCCGAGC AGGGCGCGGT GGTGGCGTAC 
GCGGTCGCGT CCGGGCTGGA CGCCGCGCAC CGGGCGGGCA TCACGCACCG GGACGTCAAG 
CCGGGCAACG TGCTGGTCGC CGCGGACGGC CGGGTGAAGC TGACCGACTT CGGCATCGCC 
CGCAACATGG CCGAGGCGAC CATGACCTCG CGCGGCATCG CGCTGGGCAC GCCCGCGTTC 
ATCGCGCCGG AGATCGCCAC CGACGGGGTC GTCACGCAGG CGGTCGACCA GTGGAGCCTG 
GGCGCGACGC TGTTCGCGGC GATGACCGGC CAGCTGCCCT ACGAGGGCGA CAACCCGCTG 
CAGACCATCA ACCAGGTGGT GCACGGCGAC GTGCCGTCCA CGGACGTGTG CGGCGAGCTG 
GCCGAGGTGG TCGGCGGGCT GATGCGCAAG GACCCGGCGG AGCGGCTGCC GCTGTCCGAG 
GTGCGCAGGC TGGTGCGCCC GCTGCTGCCG GACGCCGACG GCTTCCCGTT CGAGGAGGGC 
GCGGAGCCCA GACCGGTGGT GGAGGTGGTG CGGCCCGCGC CGGTGCGGCT GCGCTCCGCC 
GAGCCCGCGC CGGACGCCCC GCTGGCCGCC GACCCCGGCC CGCTGCCGTT CCTGCTGTCC 
GGCGGCTCGT CGGGCCGTTC GGGGCCGCAC GAGGTCGCCG ACCACTCGCA CGAGTACGGC 
GCGGGCTACG ACGACTACGA CGAGGACTAC GACGGCGACT ACGACGGGGA CTACGACGGG 
GACTACGACT TCCCGGACGC TCCCCCCGCC CGCCGCTCGG GGCTGGCCAC GGTGCTGCTG 
GCGCTGGCCG CGACGGTGCT GTTCGCCATC GGCGCGGGCT CCGGGTTCGT GCTGACCCTG 
GCCGCCGCGG GCAGACCGCT GCTCCCGCCC GCCACGTCGG GCGCGGAGCG CACCCCGTCC 
CCGCCCGCGA CGGTGACCGT GTCGCTGGTG CGCCGGGAGC TGCGGGCCGC CACCAAGGAG 
GGCGACCGGG GCGCGGGGTT CACCATCGAC GTCGGCTCGG ACTGGACCTC GTTCGTCACG 
CAGAGCGGCA ACGGCGGCGT CGCCAACAGC ACCGCCGTGC TGCTGGTGGA CCCGTCGGGC 
AGCTGGCAGG TGACGGTCGA GCGGTTCCCG GACTTCTTCC CCGGCCTGAG CGTGGACAAC 
TACCTGGACC TGGTGGCCGG GCGCTGGGGC GAGGACAACT ACTTCCCCGG TCAGGAGAAG 
CGGGCCGCCG AGCCGCTGCC GAACGCCGGG CGGGACGGCG CGGTCCAGTA CAGCTACAAC 
ACCGTCGAGC ACCCGCGCGA CGGGCAGTCC CGCGCCGGGG CGGGCTCGGC GGAGACCCGG 
CGCTCGCACT ACGCGCGGGT GCTGCCCAGG GGCAACGACC TGTGGGTGGT GGAGGTGGTG 
TTCCCGACCG AGCAGGAGGA GCAGGGCCGG GAGCAGCTGT TCGACTCGAT CGCGCCCACG 
CTGACCGTGA TCGGGTGA 

 

Protein sequence

MDSERLIAGR YRLHHVLGSG SMGTVWAAHD EVLRRAVAVK EVFQPSGMAG GEAAVLRERT 
LREARAAAQL AHPNLVTIYD VVQVDGDPYV VMELVPSESL AEVVRRCGPL TAEQGAVVAY 
AVASGLDAAH RAGITHRDVK PGNVLVAADG RVKLTDFGIA RNMAEATMTS RGIALGTPAF 
IAPEIATDGV VTQAVDQWSL GATLFAAMTG QLPYEGDNPL QTINQVVHGD VPSTDVCGEL 
AEVVGGLMRK DPAERLPLSE VRRLVRPLLP DADGFPFEEG AEPRPVVEVV RPAPVRLRSA 
EPAPDAPLAA DPGPLPFLLS GGSSGRSGPH EVADHSHEYG AGYDDYDEDY DGDYDGDYDG 
DYDFPDAPPA RRSGLATVLL ALAATVLFAI GAGSGFVLTL AAAGRPLLPP ATSGAERTPS 
PPATVTVSLV RRELRAATKE GDRGAGFTID VGSDWTSFVT QSGNGGVANS TAVLLVDPSG 
SWQVTVERFP DFFPGLSVDN YLDLVAGRWG EDNYFPGQEK RAAEPLPNAG RDGAVQYSYN 
TVEHPRDGQS RAGAGSAETR RSHYARVLPR GNDLWVVEVV FPTEQEEQGR EQLFDSIAPT 
LTVIG