Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6362 |
Symbol | |
ID | 8330573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7453733 |
End bp | 7455400 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946790 |
Product | hypothetical protein |
Protein accession | YP_003104009 |
Protein GI | 256380349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGT CCACCAACCC CGTCGTCCCG GCCGTGCCCC TCGACGTGGC GGGCATGACC TCGGCCGAAC GCGCCCGGAT GCCGCTGTCC CTGGACGTGG TCAAGGCGGC GGCCGAACAG CACGGCGTGT GCACCCGTCC CATCCTGCGC GAGGTGGTCG ACCTCGACTC CGGGGAAGTG CGCATCGTCG GCGTCCGCTG CAACTCCACG CAGGCGTCCA AGTGCGCGGC CTGCGCCGAC CGCAACCGCC GCTCCCGCAT GGCCCAGTGC CGCGAGGGCT GGCACCTCGA CGCTGAGCCT GTGGCGGAGC GCCACGCCCC GAACAGCGAC CAGGTGGGCC TGGTGACCTA CCGGGCCGAT CTCACCGCCG AGTACCGGCG GGCTGCCGCC GAGGGCGACC ACGATCAGGT TGAGGACCTG CGCGAGGGCA TCCGGGAAGC CGATGCCGAC CTGCGCGCGG AGGGCGTCCG CGGGAACCTC CCCAGCGTCG AACGCGATCC TCGACCGGCG CCCGCGCGTT CGACCCGGCG ACGCCAGGAC ACGCCGAACC TGCCCCGCCG GAAGGTCTCC AAGCGCACCG TGGGGCGGGA GTTCGCGGGC AGGTACCGGC CCTCGACCTT TATCACCCTG ACCCTGGACA CCTACGGCCC GGTCACCTCC GAAGGTGCCC CGGCCGACCC TGGCGCGTAC GACTACCGGC GGGCCGCTCG GGACGCGGTC CACTTCGCCT CCCTGGTCGA CCGCTGGTGG CAGAACCTCC GCCGGGTGGT CGGGTTCGAC GCCCAGTACT TCGGCACGGT CGAACCGCAG CGTCGCATCA CGCCTCACGC CCACTTCGCC GTGCGCGGCT CGATCCCGCA CAAGGTCGTC CGCCAGGTCA CCGCCGCGAC TTACCTCCAG GTCTGGTGGC CCGACCACGA CCAGGTGCGG TACGCGGGCG ACCTGCTCCC GGTCTGGGAC ACCCGCCAGT CAGGCTTCGT GGACCCGGAC ACTGAACGCC TGCTGACCCC GTGGGTCGAC GCGGTGGCCG ATCTGGAGCG ACCGGCCCAC GTCGCCACGT TCGGCCCGCA GGTGCACTCC AAGGGCATCC TCGGCGGCAC CGAGGAATCC GGGCGGCACA TCGGCTACCT GACCAAGTAC CTCACCAAGT CGATCACCGA AGTGGTGGAC GCGGACACCA CCCCGCGCCT GGCCGACCAC GCCGACCGCC TGGCGTCCGA ACTCGCCCTC ACCCCGTGCT CGGAGCGCTG CGCGGTCTGG CTGCTCTACG GGGTCCAGCC CAAGGGCGTC ACCTCCCGCA CCACCCCCGG CCACTGCAAG GGCAAGGCCC ACCGCCGCGA CACCCTCGGC CTGCCCGGTC GCCGGGTGCT GGTCTCGCGC CGCTGGTCCG GCAAGACCCT CTCTGAGCAC AAGGCGGACC GGGCCGCGTT CGTACGGGAA GCCTTGGCCG CCGCTGGCAT CGCCAAGCCC GACGACACCA CCGCCCGGCT CCAGTGGGGG CCGGTCCAGC CGGGGGACCC GCACGCCCCG TCACGGGCCG AACTGCTCAT GCACATGATC GCCCAGCGGT TGGCCTGGCA AGCCGAGTAC CAGCGGGCGC AAGCGGTCCT CACGCACCTG CCGCCTCCAC GGCCCGATGT TTCAGCAACT TCGCCGGTAG CGGCCTGA
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Protein sequence | MSESTNPVVP AVPLDVAGMT SAERARMPLS LDVVKAAAEQ HGVCTRPILR EVVDLDSGEV RIVGVRCNST QASKCAACAD RNRRSRMAQC REGWHLDAEP VAERHAPNSD QVGLVTYRAD LTAEYRRAAA EGDHDQVEDL REGIREADAD LRAEGVRGNL PSVERDPRPA PARSTRRRQD TPNLPRRKVS KRTVGREFAG RYRPSTFITL TLDTYGPVTS EGAPADPGAY DYRRAARDAV HFASLVDRWW QNLRRVVGFD AQYFGTVEPQ RRITPHAHFA VRGSIPHKVV RQVTAATYLQ VWWPDHDQVR YAGDLLPVWD TRQSGFVDPD TERLLTPWVD AVADLERPAH VATFGPQVHS KGILGGTEES GRHIGYLTKY LTKSITEVVD ADTTPRLADH ADRLASELAL TPCSERCAVW LLYGVQPKGV TSRTTPGHCK GKAHRRDTLG LPGRRVLVSR RWSGKTLSEH KADRAAFVRE ALAAAGIAKP DDTTARLQWG PVQPGDPHAP SRAELLMHMI AQRLAWQAEY QRAQAVLTHL PPPRPDVSAT SPVAA
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