| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6321 |
|---|
| Symbol | |
|---|
| ID | 8330532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7410398 |
|---|
| End bp | 7411870 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644946750 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_003103969 |
|---|
| Protein GI | 256380309 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.598676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCA CGATCCCGGC CCTGGCTCAG ACCCGCAACG GTATCGACTT CGCCGTGGCC
GATCTGTCCC TGGCCGACTT CGGGCGCAAG GAGATCCGGC TCGCCGAGCA CGAGATGCCC
GGTCTGATGG CGCTGCGCCG CGAGTACGCC GAGGTGTACC CGCTCAAGGG CGCGCGCGTG
TCCGGGTCGC TGCACATGAC CGTGCAGACC GCCGTGCTCA TCGAGACCCT CGTCGCGCTC
GGCGCGGAGG TCCGCTGGGC CTCCTGCAAC ATCTTCTCCA CCCAGGACCA CGCCGCCGCC
GCCGTCGTGG TCGGCCCGCA CGGCACCCCG GAGGAGCCGC GCGGTGTGCC GGTGTTCGCC
TGGAAGGGCG AGTCGCTGGC CGAGTACTGG TGGACGGCGG AGTCCATGCT CACCTGGCCG
GACGGTCAGG GTCCGAACAT GATCCTGGAC GACGGCGGCG ACGCGACCCT GCTGGTGCAC
AAGGGCGCCC AGTACGAGAA GGCCGGCGTC GTCCCGGCCG CCTCCGAGGA CGACTCGGAG
GAGTGGGCGC TGGTCCTGGA GACGCTGCGC AACTCCCTGG CCTCCGACGC GGGGAAGTGG
ACCAGGATCG CCGAGGGCAT CCGCGGGGTC ACCGAGGAGA CCACCACCGG CGTCATGCGC
CTGTACCAGC TGGCCGCCGC GGGTGAGCTG CTGTTCCCGG CGATCAACGT CAACGACGCC
GTCACCAAGT CGAAGTTCGA CAACCGGTAC GGCATCCGGC ACTCGTTGAT CGACGGGATC
AACCGGGGCA CGGACGTGCT CATGGGCGGC AAGGTCGCGG TGATCTGCGG TTACGGGGAC
GTGGGCAAGG GCGCGGCGGA GTCGCTGCGC GGGCAGGGCG CGCGGATCGT GGTGACGGAG
ATCGACCCGA TCTGCGCGTT GCAGGCGGTG ATGGACGGCT ACGACGTGCA GACCCTGGAG
TCGGTGCTGC CCAGGGCCGA CATCGTGATC ACGACCACGG GCAACAAGGA CGTGGTGCGC
ATCGAGCACA TGGCGGCGAT GAAGCACCAG GCGATCGTGG GCAACATCGG CCACTTCGAC
AACGAGATCG ACATGGCCGG CCTGGCCCGG TTCCCCGGTG TGCGGCGGAT CAACATCAAG
CCGCAGGTGG ACGAGTGGGT GTTCCCGGAC GGGCACTCGA TCCTGGTGCT CTCGGAGGGC
AGGTTGCTCA ACCTGGGCAA CGCGACCGGT CACCCGAGCT TCGTGATGTC CAACTCCTTC
TCCAACCAGG TGATCGCGCA GATCGAGCTG TTCGGCAAGC ACACCGAGTA CGACCGCGAG
GTCTACCGGC TGCCGAAGAA GTTGGACGAG AAGGTCGCCC GGATCCACCT GGAGGCCCTG
GGCGGGGAGC TGACCAAGCT GTCCAAGGAC CAGGCCGAGT ACATCGACGT CGACGTCGAG
GGGCCGTACA AGCCGGAGCA CTACCGCTAC TGA
|
|---|
| Protein sequence | MTSTIPALAQ TRNGIDFAVA DLSLADFGRK EIRLAEHEMP GLMALRREYA EVYPLKGARV
SGSLHMTVQT AVLIETLVAL GAEVRWASCN IFSTQDHAAA AVVVGPHGTP EEPRGVPVFA
WKGESLAEYW WTAESMLTWP DGQGPNMILD DGGDATLLVH KGAQYEKAGV VPAASEDDSE
EWALVLETLR NSLASDAGKW TRIAEGIRGV TEETTTGVMR LYQLAAAGEL LFPAINVNDA
VTKSKFDNRY GIRHSLIDGI NRGTDVLMGG KVAVICGYGD VGKGAAESLR GQGARIVVTE
IDPICALQAV MDGYDVQTLE SVLPRADIVI TTTGNKDVVR IEHMAAMKHQ AIVGNIGHFD
NEIDMAGLAR FPGVRRINIK PQVDEWVFPD GHSILVLSEG RLLNLGNATG HPSFVMSNSF
SNQVIAQIEL FGKHTEYDRE VYRLPKKLDE KVARIHLEAL GGELTKLSKD QAEYIDVDVE
GPYKPEHYRY
|
|---|
| |