Gene Amir_6231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6231 
Symbol 
ID8330442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7309015 
End bp7309608 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content75% 
IMG OID644946663 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003103882 
Protein GI256380222 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCCGA CCGCGAAGCA GACCCGGCGC GAGCAGATCC TCTCGGCGGC GGCCGAGCTG 
TTCGCCCGCC ACGGTTTCCA CGGCGTGGGC ATCGACGACA TCGGCGCCGC GGTCGGCATC 
TCCGGGCCCG CCCTCTACCG GCACTTCCGC AGCAAGGACG CGATGCTCGG CGAGATGCTG 
ACCGCCATCA GCGAGCGCCT GCTCGACGGC GGCCGGGCCA GGGTCGACGC CGCCGCCGAC 
CCGGAGGCCG CGCTGCGCGC GCTGGTCGGC TGGCACGTGG ACTTCGCGCT GGACGACCCG 
GCGCTGATCA CCGTGCAGAT GCGCAACCTG GCCAACCTGA CCGACCCGGA CCGCAGGCGG 
GTGCGGGCGC TCCAGCGCGG CTACGTCGAG GTGTGGGTGC GGGTCGTCCA GGACGGCGTG 
CGCGGGGTGG ACGAGCCGAC CGCGCGGGCC GCCGCGCACG CGGTCTTCGG CTTGATCAAC 
TCCACCCCGC ACAGCGCGCA CCTGGACCGC GAGCAGATGG CCGCCCTGCT GACCAGGATG 
GCGCTGGCGT CGATCACCTC GTCCGGCGCG CCGCGGACCG ACCAGCCCGC CTGA
 
Protein sequence
MTPTAKQTRR EQILSAAAEL FARHGFHGVG IDDIGAAVGI SGPALYRHFR SKDAMLGEML 
TAISERLLDG GRARVDAAAD PEAALRALVG WHVDFALDDP ALITVQMRNL ANLTDPDRRR 
VRALQRGYVE VWVRVVQDGV RGVDEPTARA AAHAVFGLIN STPHSAHLDR EQMAALLTRM 
ALASITSSGA PRTDQPA