Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6229 |
Symbol | |
ID | 8330440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7305127 |
End bp | 7307058 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644946661 |
Product | Carbamoyl-phosphate synthase L chain ATP- binding |
Protein accession | YP_003103880 |
Protein GI | 256380220 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTGT TCGACACCGT CCTGGTCGCC AACCGAGGCG AGATCGCCGT CCGGGTCGTC CGGGCGCTGC GCCGCGCGGG CATCCGGTCC GTCGCGGTGT TCAGCGACGC CGACGCGGAC GCCCTGCACG TGCGGCTCGC CGACGCCGCC GTGCGCATCG GGCCCGCCGC CGCCCGCGAC AGCTACCTCG ACGCGGGCCG GATCGTCGCC GCCGCGCTGG AGACCGGCGC GCGGGCCGTC CACCCCGGCT ACGGGTTCCT CGCCGAGAAC GCCGGGTTCG CCCGCGCCTG CGCCGAGGCC GGCCTGGTGT TCATCGGGCC GCCCGTGCGG GCCATCGAGG TGATGGGCGA CAAGATCCAG GCCAAGCTCA CCGCCGCGGC CGCCGGGGTG CCGGTGGTGC CGGGGCGCGC CGAACCCGGC ATGGGGGACG ACGAGCTGGT CGCCGCCGCC ACCGAGATCG GGTTCCCGGT GCTGGTCAAG CCGTCCGCCG GGGGTGGCGG CAAGGGGATG CGGCTGGTGC GCGAGGCCGC CGGGCTGCGC GAGGCCGTCG AGTCCGCCCG GCGGGAGGCG CGCGCGTCCT TCGGGGACGA CGCGCTGCTC GTGGAGCGGT ACGTGTCCGA CCCCCGGCAC ATCGAGATCC AGGTGCTCGC CGACGCGCAC GGCACGACCG TGCACCTCGG CGAGCGCGAG TGCAGCCTCC AGCGGCGGCA CCAGAAGGTC ATCGAGGAGG CGCCCTCCCC GCTGCTCGAC GCGGACGCGC GGGAGGCCAT GGGGCGCTCG GCCGTGCTGG CCGCCGAGTC GGTCGGCTAC GTCGGCGCGG GCACCGTCGA GTTCATCGTG GACGGCACGA CCGGCGAGCA CTTCTTCCTG GAGATGAACA CCCGGCTCCA GGTCGAGCAC CCGGTCACCG AGCTGGTCAC CGGCGTCGAC CTGGTCGAGC AGCAGCTGCG CGTGGCCGCC GGGGAACCGC TCGGGTTCAC CTCCGTCGAG CTGCGCGGGC ACGCCGTGGA GGCGCGGGTG TACGCCGAGG ACCCGGCGCG CGGGTTCCTG CCCACCGGCG GGCGGGTGCT GCTGCTGCGC GAGCCCGACG AGGTCCGGGT GGACTCGGCG CTGCGCGAGG GCCTGGTCGT CGGCAGCGAC TACGACCCCA TGCTGGCCAA GGTGATCGCG CACGGCGCCA CCCGCGCCGA GGCGCTGCGC AGGCTCGACG CCGCGCTGTC GCGCACCGCC GTGCTCGGGG TGACCACGAA CGTGCCGTTC CTGCGGGCGC TGCTGGCCCA CCCGGACGTG CGCGCCGGGC GACTGGACAC CGGGCTGGTG GAGCGCTCGC TCGACGCGCT GGTGCCCGGC GGGACGCCGG ACGACGTGCT CGTCGCGGCG GGCTGCGACC GGTTCCTCGC GCTGGGCGGC GCCGACCCGT GGGAGCGGCT CACCGGCTGG CGGGTCGGCG AGCGCGCCTG GGCGCGGTGG GTGCTCGACG GCGCCGAGGT GCGGGTGCGC GGCGTCGCGC CCGACGTGGA GGTGCGCGTC GGCGACGCCG ACCCGGTGCG GGTGACCGCG CGGCGCGAGG GCGACGAGCT GGTCGTCGGC GCGCGCCGGT ACGCGGTGGC CCGCGACGGG GACGCGCTGT GGCTCGGCCG CGACGGCGGG GCCTGGCAGG TCGTGGAGAC GGCCCCGGAC GTGGCCGCCG CGCGCGGGGC CTCGTCCGGC GGACCGGTCA CCAGCCCCAT GCCGGGGACG GTGCTGCTGG TGCGCGCCGC CGAGGGCGAG GCCGTCGTCG CCGGGCAGGC GCTGTTCGTG GTCGAGGCGA TGAAGATGGA GCACACCGTC ACCGCGCCGG TCGACGGGGT GCTCACCGGG GTACGGGTCC GGCCCGGCGA CCAGGTCGCG CTGGACGAGC AGTTGGCCGC AGTACTGCCA CCCGAGGAGT GA
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Protein sequence | MRVFDTVLVA NRGEIAVRVV RALRRAGIRS VAVFSDADAD ALHVRLADAA VRIGPAAARD SYLDAGRIVA AALETGARAV HPGYGFLAEN AGFARACAEA GLVFIGPPVR AIEVMGDKIQ AKLTAAAAGV PVVPGRAEPG MGDDELVAAA TEIGFPVLVK PSAGGGGKGM RLVREAAGLR EAVESARREA RASFGDDALL VERYVSDPRH IEIQVLADAH GTTVHLGERE CSLQRRHQKV IEEAPSPLLD ADAREAMGRS AVLAAESVGY VGAGTVEFIV DGTTGEHFFL EMNTRLQVEH PVTELVTGVD LVEQQLRVAA GEPLGFTSVE LRGHAVEARV YAEDPARGFL PTGGRVLLLR EPDEVRVDSA LREGLVVGSD YDPMLAKVIA HGATRAEALR RLDAALSRTA VLGVTTNVPF LRALLAHPDV RAGRLDTGLV ERSLDALVPG GTPDDVLVAA GCDRFLALGG ADPWERLTGW RVGERAWARW VLDGAEVRVR GVAPDVEVRV GDADPVRVTA RREGDELVVG ARRYAVARDG DALWLGRDGG AWQVVETAPD VAAARGASSG GPVTSPMPGT VLLVRAAEGE AVVAGQALFV VEAMKMEHTV TAPVDGVLTG VRVRPGDQVA LDEQLAAVLP PEE
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