| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6180 |
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| Symbol | |
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| ID | 8330391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7242825 |
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| End bp | 7245263 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946614 |
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| Product | beta-mannosidase protein |
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| Protein accession | YP_003103833 |
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| Protein GI | 256380173 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.981115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCC GAACGGTTCA CGACGGGTGG CATTTGCGCG CGGTGGGCGG ACCCGTGCCC
GAGCACCTCG CGGACGCGAC CGCGCCCGCC GAGGTCCCCG GCAGCGCCCA CCTGGACCTC
CTGCGCGCCG GGCTGATCCC CGACCCGTAC CTGGACCGGA ACGAGGCGGA GCTGGCCTGG
GCGCACCGGG CGCGGTGGCG CTACGCGACG GTCCTCACCT CGGAGGCCGC GCGCGCGGGC
GAGAAGGTGG AGCTGGCCTT CGACGGCCTG GACACGGTGG CGACCGTCGT GCTCAACGGG
CACCCCCTCG GCTCCACCGC CAACATGCAC CGAAGCTACC GCTTCGACGT CCGCGACGTG
CTCAGGGACG GCGAGAACGA CCTGGTGGTG GAGTTCGACT CCGCCCTGGA GCACGCCGAG
CGGACCCAGG CCGAGCTGGG CGAGCGCCCC CGCGCCTACC CGCACCCGTT CAACGCGATC
CGCAAGATGG CCTGCTCGTT CGGCTGGGAC TGGGGCCCCG ACCTGCAGAC GGCGGGCATC
TGGAAGCCGG TCCGCCTGGA GCGCTGGACC GGCGCCCGGC TCGCCGAGGT CCGACCGCTG
GTGACCGTGG ACCCGGACGG CACCGGGCGC GTCGAGGTGC ACATCCGGCT CGACCGCGCC
GGCGACGCCC CGAGCCTGCT CACCGCCCGC GTCGGCGACC ACGAGCAGCG CGCCACCGTC
GACGGCGACA CCGCCGTGCT CACCGTCCTG GTCCCCGACG CCCCGCTGTG GTGGCCGGTC
GGCTACGGCG AGCAACCGCT GCTCGACCTG GAGGTCGTCG CCGAGTCGGG CGACGAGCGC
GACACCTTCA CCCGCCGCAT CGGCTTCCGC ACCATCACCG TCGACACCGA GCCCGACGCC
GACGGCACCC CGTTCACCTT CGTCGTCAAC GGCGAGCGGG TCTTCGCCAA GGGCGCCAAC
TGGATCCCCG ACGACCACTT CCTCACCCGC GTCACCCGCG ACCGCCTGGC CCGCCGCGTC
GACCAGGCCC TCGCCGCCAA CCTCAACCTG CTGCGGATCT GGGGCGGCGG GATCTACGAG
ACCGAGGACT TCTACGACGT CTGCGACGAG CGCGGCGTCC TGGTCTGGCA GGACTTCCCG
TTCGCCTGCG CCGCCTACGC CGAGGAGGGC GAGCTGCGCG CCGAGGTCGA GGCCGAGGCC
CGCGAGAACG TCGCCCGCCT CACCCCGCAC GCCTCCCTCG CGCTGTGGAA CGGCAACAAC
GAGAACCTCT GGGGCCACGA GGACTGGGGC TGGAAGGAGC AGTTGGGCGA GCTGACCTGG
GGCCTTGGCT ACTACACCGA CCTGCTGCCC GCGATCGTCG CCGAGCTCGA CCCCACCCGC
CCCTACTCGC CAGGCAGCCC GTACAGCCCC GGCGAGGCCC ACCCCAACGA CCAGGACCAC
GCCACCCGCC ACGAGTGGGA GGTGTGGAAC CGCGTCGACT ACACCCGCTA CCGCGACCAC
GCGCCCCGCT TCTGCGCCGA GTTCGGCTTC CAGGGCCCGC CCACCTGGCG CACCCTCACC
GACTGGGTGC ACGAGGCCGA CGGTCCCATG ACCCCCTCCT CGCCCGCGTT CCTGCTGCAC
CAGAAGGCCG ACGACGGCAA CGGCAAGCTC GACCGGGGCA TGGAGCCGCA CCTGCCGGTC
CCCGAGTCCT TCGAGGACTG GCACTGGGCC GCCCAGCTCA ACCAGGCCCG CGCCGTCGCG
TTCGGCGTCG AGCACTTCCG CTCGCACTGG CCGCGCACGG CGGGCGCGGT CGTGTGGCAG
CTCAACGACT GCTGGCCGGT CACCTCCTGG GCCGCCGTCG ACGGCGAGGG CCGGGAGAAG
CCGCTGTTCC ACGCCCTGAA GCACGCGTTC GCGCCCCGGC TGCTGACCGT CCAGCCGCGC
GACGGCCGCA CCGCCGTCGT CGTGGTCAAC GACACCGCCG AGCCCTGGGA CGAGGACCTC
GTGGTCCGCC GGATCTCGTT CGACGGGCAC GAGCTGGCGA CGACTACACT GCGGCTCGGG
GTCGCCGCCC GCTCCACGTC CGTGGTCCAG CTGCCGGAGT CCCTGCTGTC AGCGGACAAC
CGGGAGGCCG AGGTCGTGGT AGCCACCGCG GGTGGGGTGC GCGCGCTGCA CCTGTTCGCC
GAGGACCGCG ACGCCGCGCT CGACCCGTCC CCGCTCACCG CCACCGCGCA CCGCGTCGAC
GGCGGCTACC GGGTCGAGGT CACCGCCACC GCGCTCGCCC GCGACGTCGC GCTGCTGGTC
GACAAGGCCG CGCCCGACGC GCGCGTGGAC GACCAGCTCG TCACGCTGCT CCCCGGCGAG
CGGCACGCCT TCCACGTCAC CACCTGCGCC GACCTGGACC CGTCCGCGCT GACCGACCCG
CGCGTGCTGC GCACGGCCAA CGCCCTGGTG GGTCGGTGA
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| Protein sequence | MIRRTVHDGW HLRAVGGPVP EHLADATAPA EVPGSAHLDL LRAGLIPDPY LDRNEAELAW
AHRARWRYAT VLTSEAARAG EKVELAFDGL DTVATVVLNG HPLGSTANMH RSYRFDVRDV
LRDGENDLVV EFDSALEHAE RTQAELGERP RAYPHPFNAI RKMACSFGWD WGPDLQTAGI
WKPVRLERWT GARLAEVRPL VTVDPDGTGR VEVHIRLDRA GDAPSLLTAR VGDHEQRATV
DGDTAVLTVL VPDAPLWWPV GYGEQPLLDL EVVAESGDER DTFTRRIGFR TITVDTEPDA
DGTPFTFVVN GERVFAKGAN WIPDDHFLTR VTRDRLARRV DQALAANLNL LRIWGGGIYE
TEDFYDVCDE RGVLVWQDFP FACAAYAEEG ELRAEVEAEA RENVARLTPH ASLALWNGNN
ENLWGHEDWG WKEQLGELTW GLGYYTDLLP AIVAELDPTR PYSPGSPYSP GEAHPNDQDH
ATRHEWEVWN RVDYTRYRDH APRFCAEFGF QGPPTWRTLT DWVHEADGPM TPSSPAFLLH
QKADDGNGKL DRGMEPHLPV PESFEDWHWA AQLNQARAVA FGVEHFRSHW PRTAGAVVWQ
LNDCWPVTSW AAVDGEGREK PLFHALKHAF APRLLTVQPR DGRTAVVVVN DTAEPWDEDL
VVRRISFDGH ELATTTLRLG VAARSTSVVQ LPESLLSADN REAEVVVATA GGVRALHLFA
EDRDAALDPS PLTATAHRVD GGYRVEVTAT ALARDVALLV DKAAPDARVD DQLVTLLPGE
RHAFHVTTCA DLDPSALTDP RVLRTANALV GR
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