Gene Amir_6024 details

Gene Information

• Locus tag: Amir_6024
• ID: 8330234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 7073265
• End bp: 7075109
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644946457
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_003103677
• Protein GI: 256380017
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCCCGC TCCGTTCCCG AACCACCACC CACGGCCGCA ACGCCGCAGG CGCCCGCGCG 
CTGTGGCGCG CCACCGGCAT GACCGACTCG GACTTCGGCA AGCCGATCGT GGCGATCGCC 
AACTCGTACA CGCAGTTCGT GCCCGGTCAC GTGCACCTGC GCGACCTCGG CGACATCGTC 
GCCGAGGCGA TCCGCGAGGC GGGCGGGGTG CCGCGCGAGT TCCACACCAT CGCGGTGGAC 
GACGGGATCG CGATGGGCCA CAGCGGGATG CTCTACTCGC TGCCCTCGCG CGAGATCATC 
GCCGACTCGG TCGAGTACAT GGTGAACGCG CACCAGGCCG ACGCGATCGT CTGCATCTCC 
AACTGCGACA AGATCACGCC GGGGATGCTC AACGCCGCGA TGCGGCTGAA CATCCCGGTC 
GTGTTCGTCT CCGGCGGGCC GATGGAGGCG GGCAAGGCGG TCGTGGTGGA CGGCGTCGCC 
GTCGCGCCGA CCGACCTGAT CACCGCGATC TCCGCGTCCG CGTCGCCGGA GGTGGACGAC 
GAGGGCCTGT CGGTCGTGGA GCGCTCGGCG TGCCCGACCT GCGGGTCGTG CTCGGGCATG 
TTCACCGCGA ACTCGATGAA CTGCCTCACC GAGGCGCTGG GCCTGGCGCT GCCGGGCAAC 
GGCTCGACGC TGGCCACGCA CTCCGCGCGC CGCGAGCTGT TCTCCGAGGC CGGTCGGGTC 
GTGGTGGAGC TGTGCAAGCG CTACTACGGC GAGGACGACG AGTCGGTGCT GCCGCGCTCG 
ATCGCGAACC GCGCCGCGTT CGAGAACGCG ATGGCGCTGG ACATGGCCAT GGGCGGCTCG 
ACCAACACCG TGCTGCACAT CCTGGCCGCC GCGCAGGAGG GCGAGGTCGA GTTCGACCTG 
TCCGACATCA ACGCGCTCAG CCGCCGGGTG CCGTGCCTGG CGAAGGTCTC GCCGAACTCC 
GACTACCACA TGGAGGACGT GCACCGGGCC GGTGGCATCC CCGCGCTGCT GGGCGAGCTG 
TACCGGGCCG GGCTGCTCAA CGAGGACGTC ACCACCGTCC ACTCGCGCAC GATGGCGCAG 
TGGCTCGGCG AGTGGGACGT CAGGGCCGAG TCGCCGTCCG AGCGCGCGGT GGAGCTGTTC 
CACGCCGCGC CCGGCGGGGT GCGCACCACG CAGGCGTTCT CCACCTCCAA CCGCTGGTCG 
AAGCTGGACA CCGACGCGGC GGGCGGGTGC ATCCGGGACG TCGAGCACGC GTACACCAAG 
GACGGCGGGC TGGCCGTCCT GCACGGCAAC CTGGCCGAGT CCGGCGCGGT CATCAAGTCG 
GCGGGCATCG ACGAGGACCT GTGGCGGTTC GAGGGCCCGG CGCGCGTGGT CGAGTCCCAG 
GAGCAGGCGG TCTCGGTGAT CCTGAACAAG GAGATCCAGG CCGGTGACGT GCTCGTGGTC 
CGCTACGAGG GCCCGTCCGG CGGTCCGGGG ATGCAGGAGA TGCTGCACCC GACCGCGTTC 
CTCAAGGGCG CGGGCCTCGG CAAGAAGTGC GCGCTGATCA CGGACGGCCG GTTCTCCGGC 
GGCACCTCGG GCCTGTCCAT CGGCCACGTC TCGCCGGAGG CGGCGGGCGG CGGGCTGATC 
GGCCTGGTGC AGGACGGCGA CCGGATCGTC ATCGACGTGC ACGAGCGCAA GCTGGAGCTG 
CTGGTCGACG AGGCGGTGCT GGCCGACCGG CGGGCGAAGA TGGAGACCTC GGAGCGGCCG 
TGGCAGCCGG TGGACCGGGT GCGCCCGGTG ACGGCGGCGC TGCGCGCGTA CGCGCGGATG 
GCGACGGACG CGTCGAGGGG CGCGGTGCGC GACGTCAACC GGTGA 

 

Protein sequence

MPPLRSRTTT HGRNAAGARA LWRATGMTDS DFGKPIVAIA NSYTQFVPGH VHLRDLGDIV 
AEAIREAGGV PREFHTIAVD DGIAMGHSGM LYSLPSREII ADSVEYMVNA HQADAIVCIS 
NCDKITPGML NAAMRLNIPV VFVSGGPMEA GKAVVVDGVA VAPTDLITAI SASASPEVDD 
EGLSVVERSA CPTCGSCSGM FTANSMNCLT EALGLALPGN GSTLATHSAR RELFSEAGRV 
VVELCKRYYG EDDESVLPRS IANRAAFENA MALDMAMGGS TNTVLHILAA AQEGEVEFDL 
SDINALSRRV PCLAKVSPNS DYHMEDVHRA GGIPALLGEL YRAGLLNEDV TTVHSRTMAQ 
WLGEWDVRAE SPSERAVELF HAAPGGVRTT QAFSTSNRWS KLDTDAAGGC IRDVEHAYTK 
DGGLAVLHGN LAESGAVIKS AGIDEDLWRF EGPARVVESQ EQAVSVILNK EIQAGDVLVV 
RYEGPSGGPG MQEMLHPTAF LKGAGLGKKC ALITDGRFSG GTSGLSIGHV SPEAAGGGLI 
GLVQDGDRIV IDVHERKLEL LVDEAVLADR RAKMETSERP WQPVDRVRPV TAALRAYARM 
ATDASRGAVR DVNR