| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5961 |
|---|
| Symbol | |
|---|
| ID | 8330168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7007648 |
|---|
| End bp | 7008076 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644946392 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_003103615 |
|---|
| Protein GI | 256379955 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA GTGTGACCAA TCAGGACGCC TTACAACTCG TGGTCGCGGT GCACCGCCTG
GTGCGGAGCC TGCGGCAGTC GGCATCGGTG CGCAGGCTCC AGCCGACCCA GCTGCTGGTG
CTGGCCGAGC TGTCGAACCA CGGGCCGATG CGCATCGGCG AGATCGCGGT GCGCGCGCTC
TGCTCGCAAC CGACAGCGAC AACGGTGGTG ACCGGCCTGG AGTCGAACGG GCTCGTCCGC
CGCGAGGCCG ACCCGGCCGA CGGCAGGGCG ACGATCGTGG TGCTGACCGG CGCGGGCCGG
GAAACGGTGC TGTCGATGGC GCACGGCGAG GCCGAGCTGC TGTCGGAGCG GCTCTCGGCG
CTGTCGCCGG AGGAGCAGCA CCGGGTCCGC GCGGTGACGC CGCTGCTGCG CAGGCTCGCC
GACCGGTGA
|
|---|
| Protein sequence | MTASVTNQDA LQLVVAVHRL VRSLRQSASV RRLQPTQLLV LAELSNHGPM RIGEIAVRAL
CSQPTATTVV TGLESNGLVR READPADGRA TIVVLTGAGR ETVLSMAHGE AELLSERLSA
LSPEEQHRVR AVTPLLRRLA DR
|
|---|
| |