| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5911 |
|---|
| Symbol | |
|---|
| ID | 8330118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6953749 |
|---|
| End bp | 6954663 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644946343 |
|---|
| Product | ribosomal protein S2 |
|---|
| Protein accession | YP_003103566 |
|---|
| Protein GI | 256379906 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00672322 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCG TCACCATGAA GCAGCTGCTC GACAGCGGCG TTCACTTCGG GCACCAGACC
CGGCGCTGGA ACCCGAAGAT GAAGCGCTAC ATCTTCACCG AGCGCAACGG CATCTACATC
ATCGACCTGA TGCAGACGCT GACCTACATC GACCGGGCGT TCGAGTTCGT CCGCGAGACG
GTCGCGCACG GCGGGTCGAT CCTGTTCATC GGCACCAAGA AGCAGGCGCA GGAGGCCATC
GCCAACGAGG CCCTCCGCGT CGGCATGCCC TTCGTGAACC AGCGCTGGCT GGGCGGCATG
CTCACCAACT TCTCCACGGT GCACAAGCGC CTCCAGCGGC TCAAGGAGCT GGAGTCGATG
GAGCAGACCG GCGGTTTCCA GGGTTTCACC AAGAAGGAAA TCCTGATGAT GAACCGCGAG
AAGGACAAGC TGGAGCGCAC GCTCGGCGGT ATCCGCGACA TGTCCAAGGT GCCCAGCGCC
GTCTGGATCG TGGACACCAA GAAGGAGCAC ATCGCGGTCG GTGAGGCTCG CAAGCTGAAC
ATCCCGATCG TCGCGATCCT CGACACCAAC TGCGACCCGG ACGAGGTCGA CTACCCGATT
CCGGGCAACG ACGACGCGAT CCGCTCGGCC GCGCTGCTGA CCAAGGTGGT GGCCGAGGCC
GCCGCCGCCG GTCTCATGTC GCGCTCCGGC GTCCGCACCG GCAACGCCGG TGGCGCGGAG
AAGCCCGAGC CGGGCACCGA CGAGCCGCTG GCCGAGTGGG AGCAGGAGCT GCTGGTCAAC
GCGGAGGCCC CGGCCGCCGC CGAGACCCCC GCCGCTGAGG CCCCCGCCGC TGCCGAGGCC
CCCGCTGCCG AGGCCGCTGA GGCCCCCGCC GCCGCCGAGG CGCCCGCCGA GGGCACCGAG
ACCGTCCAGT CCTGA
|
|---|
| Protein sequence | MAVVTMKQLL DSGVHFGHQT RRWNPKMKRY IFTERNGIYI IDLMQTLTYI DRAFEFVRET
VAHGGSILFI GTKKQAQEAI ANEALRVGMP FVNQRWLGGM LTNFSTVHKR LQRLKELESM
EQTGGFQGFT KKEILMMNRE KDKLERTLGG IRDMSKVPSA VWIVDTKKEH IAVGEARKLN
IPIVAILDTN CDPDEVDYPI PGNDDAIRSA ALLTKVVAEA AAAGLMSRSG VRTGNAGGAE
KPEPGTDEPL AEWEQELLVN AEAPAAAETP AAEAPAAAEA PAAEAAEAPA AAEAPAEGTE
TVQS
|
|---|
| |