Gene Amir_5877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5877 
Symbol 
ID8330084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6919203 
End bp6919730 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content73% 
IMG OID644946309 
ProductPEBP family protein 
Protein accessionYP_003103532 
Protein GI256379872 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCG ACCGACCCGT CGCGCCGGAC CCGTACTCGC TGCTCCCGAC CGTGCCCGCG 
TTCCAGGTCA CCTCGACCGA CGTGGCCGAC GGGCGGCCCC TGCCGCAGGC GCAGGTGTTC
GAGGGCGGCA ACACCTCGCC GCAGCTGTCC TGGAGCGGGT TCCCCGAGGG GACGAAGAGC
TTCGTGGTGA CCTGCTTCGA CCCGGACGCC CCCACCCCGT CCGGCTTCTG GCACTGGGTC
GCGGTGAACC TGCCGGTCTC GACCACCTCG CTGGACACCG GCGCGGGCGC GGACGACGCC
TCGCTGCCCG GCGGCGCGTT CCACGTGCGC AGCGACTACG GCACCCGCGC GTTCGGCGGC
GCGGCCCCGC CCCAGGGCGA CCACCCGCAC CGCTACTTCT TCGTGGTGCA CGCGGTCGAC
GTCGAGGCGC TGGACGTGGA CGGCGACGCC TCTCCCGCCG TGGTGAGCTT CAACCTGGCG
TTCCACACCC TGGCGCGGGC GATCATCACC CCCACCTACC AGCACTGA
 
Protein sequence
MSLDRPVAPD PYSLLPTVPA FQVTSTDVAD GRPLPQAQVF EGGNTSPQLS WSGFPEGTKS 
FVVTCFDPDA PTPSGFWHWV AVNLPVSTTS LDTGAGADDA SLPGGAFHVR SDYGTRAFGG
AAPPQGDHPH RYFFVVHAVD VEALDVDGDA SPAVVSFNLA FHTLARAIIT PTYQH