Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5829 |
Symbol | |
ID | 8330036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6866028 |
End bp | 6867347 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946263 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003103486 |
Protein GI | 256379826 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.50819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGGTCG ATCGCGCCAC GCGCCGAGCG TGGCTGATCT GGTCCACCGC CGTCATCGTC TACGTCGCGG CCCTGTTCCA CCGCACCTCG CTGGGGGTCG CCAGCCTGGA GGCGGGGGAG CGGTTCGCCG TCGGGTCCGC CGCGCTCGGC GCGTTCACCG TGCTGCAGAT CGGCCTGTAC GCGGCCATGC AGATCCCCAC CGGCCTGCTG GTCGACCGGT TCGGGGCCCG CCGCGTGCTG GTCGCCGCCG CCCTCGTCAT GGGCCTGGGG CAGACCCTGT TCGCCCTCGC GCACTCGTAC CCGCTCGGCC TCGCCGCGCG CGCGGTGCTC GGCGTCGGCG ACGCCTTGAC CTGGGTGAGC GTGCTGCGGC TGGCCGCCGC GCACTTCCCG CCGCGCCGGT TCACCGTGGT GATGTCGCTG TCCTCCGCGC TCGGCGCGAT CGGCAACCTG GCGGCCACCG TGCCGCTGAC CCTCATGCTC GACGGCATCG GCTGGACCAC CACGTTCCTG GTCGCGGGCG TGGCCACCGC CGCCTACGCG GCCGTGGTGG CGCTGAAGGT GCGGGAGACC CCCGACGGCG TCGTGCAGCC GGAGCCCGAG CGGGTGCGGC TGAGCGTGGT GGGCCGCAAG GTCGCCGAGG CCTGGCACGT GCCCGGCACC AGGCTCGGCT TCTGGGTCCA CTTCACCACC ATGTCCACCC CCATGCTGCT CAGCCTGCTG TGGGGCTACC CGTACCTGGT CGAGGCGCAG GGGATGCCCG CGGCGAGCGC GTCGGCGGTG CTGAGCGTGA TGGTCGTGGT CGGCCTGGTC TCCGGACCGG TGCTCGGCGG GGTCATCGCC CGCAGCCCGG AGTGGCGGAT GCCGCTCGTC GGCGGGTACC TGGCCGTCGC GGTGGGCGTC TGGGCGGTGC TGCTCGGCTG GCCGGGAGGG GTGCTGCCGC AGCCGCTGCT CCCGGTCGCG TTCGGCCTGC TCGCCCTCGG CGGTCCCGCG TCGAGCGTGG CGTTCGCGCT GGTCAGGGAC TACAACCCGC TGCACCGGGT GAGCACCGCG ACCGGCGTCG CGAACGTCGG CGGGTTCGCC GCGATCACCG TCATGGCGCT GGTCATCGGC GTGCTGCTGG ACGTGGTGTC GTTCCTGCCG CCCGCCCAGG CGTACCGGGT GGCGCTGCTG TCCGTGGCGG CCGTGCTGGT GCTCGGCACC TGGCGCACGG TCGTGTGGTG GCGCCGGGCC CGCGCCGCCG TGTTCGCCGC CGAGGACCGG GGCGAGGAGG TGCCCGTGCA GATCCGCCGG GGCCGCTTCG ACATGCGCCT CGCGGCCTGA
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Protein sequence | MPVDRATRRA WLIWSTAVIV YVAALFHRTS LGVASLEAGE RFAVGSAALG AFTVLQIGLY AAMQIPTGLL VDRFGARRVL VAAALVMGLG QTLFALAHSY PLGLAARAVL GVGDALTWVS VLRLAAAHFP PRRFTVVMSL SSALGAIGNL AATVPLTLML DGIGWTTTFL VAGVATAAYA AVVALKVRET PDGVVQPEPE RVRLSVVGRK VAEAWHVPGT RLGFWVHFTT MSTPMLLSLL WGYPYLVEAQ GMPAASASAV LSVMVVVGLV SGPVLGGVIA RSPEWRMPLV GGYLAVAVGV WAVLLGWPGG VLPQPLLPVA FGLLALGGPA SSVAFALVRD YNPLHRVSTA TGVANVGGFA AITVMALVIG VLLDVVSFLP PAQAYRVALL SVAAVLVLGT WRTVVWWRRA RAAVFAAEDR GEEVPVQIRR GRFDMRLAA
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