Gene Amir_5788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5788 
Symbol 
ID8329995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6825326 
End bp6826057 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content76% 
IMG OID644946224 
ProductMethyltransferase type 12 
Protein accessionYP_003103447 
Protein GI256379787 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCGG ACGCCGTACA GAGGGTGCTC GACACCGAGT TGACCGCCGC GAGGGACCGG 
CGGGGCGGCG AGCCCCCCAG GGTCCTGGAC GTCGGCGGCG GCACCGGCGT GTGGGCCGTC
CAGCTGGCCG CCGCGGGCTG CGCGGTCACC GTGGTCGACC CGAGCCCCGA CGCGCTGGCC
ACCCTGACCC GGCGCGCCGC CGAGGCGGGC GTCGCCGATC GGGTGATCGC CGTGCAGGGC
GACACCGACG CCCTCGGCGA GCTGGTCAGC GACGGCGCCG CCGACCTGGT GCTCGGCCAC
GGGCTGCTGG AGGTCGTGGA CGACGCGGCC ACCGCGCTCG CCGCCCTCGC CGCCGCCGCG
GCCCCCGGCG GGGCGGTCTC GGTGCTGGTG GCCAACCGCT ACGCCGCCGT GCTGCACCGG
GCCATCGGCG GCCGGATCGT GGACGCGCGC AGGCTCCTGG ACGACGAGGG CGGTCAGCTC
GCCGGGACCC GCGACCCGCT GCTGCGCCGG TTCGACGTGA CAGGTCTTGA GACCCTGGTC
TCATCGGCCG GGTTGGCGGT AGAAATTCTC CAGGGGCACG GGGTCGTCGC AGATCTGGTG
CCCGGCGCCG TGCTGGAGGC GAATCCCGGC GCGGCTGAGG CGTTGGCAGA GCTGGAACTG
GCCGCCGCGA CACGATCCCC CCTGCGGGAC GTGGCCGCGC GGTTGCACGT GCTGGCTCGC
CGCACGGGGT GA
 
Protein sequence
MRPDAVQRVL DTELTAARDR RGGEPPRVLD VGGGTGVWAV QLAAAGCAVT VVDPSPDALA 
TLTRRAAEAG VADRVIAVQG DTDALGELVS DGAADLVLGH GLLEVVDDAA TALAALAAAA
APGGAVSVLV ANRYAAVLHR AIGGRIVDAR RLLDDEGGQL AGTRDPLLRR FDVTGLETLV
SSAGLAVEIL QGHGVVADLV PGAVLEANPG AAEALAELEL AAATRSPLRD VAARLHVLAR
RTG