Gene Amir_5753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5753 
SymbolileS 
ID8329960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6782243 
End bp6785356 
Gene Length3114 bp 
Protein Length1037 aa 
Translation table11 
GC content71% 
IMG OID644946189 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_003103412 
Protein GI256379752 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTACC CCAAGGTGGG AGCGGACTCC GTCCCCTCCC AGCCGTCCTT CCCCGCGCTG 
GAGCGCGACG TGCTCGGCTT CTGGGAGGAC GACCAGACCT TCCAGGCCTC CGTCGACGCC
AGGCCCGCCG GTGAGAACGG CTCCAACGAG TTCGTCTTCT ACGACGGCCC GCCGTTCGCC
AACGGCCTGC CGCACTACGG CCACCTGCTG ACCGGCTACG TCAAGGACCT GGTGCCGCGC
TACCGCACCA TGCGCGGCCA GCACGTGGAG CGCCGTTTCG GCTGGGACAC GCACGGCCTT
CCCGCCGAGG TCGAGGCGGA GAAGCAGCTC GGCTTCTCGT CCAAGAGCGA CATCGAGGCC
TTCGGCATCG ACAAGTTCAA CGACGCCTGC CGCACGTCCG TGCTGCGCTA CACCGACCAG
TGGCGCGAGT ACGTGACGAA GCAGGCCCGC TGGGTCGACT TCGACAACGA CTACAAGACC
CTCGACCTGG ACTACATGGA AAGCGTCATG TGGGCCTTCA AGACCCTGTG GGACAAGGGC
CTGGTCTACG AGGGCTTCCG GGTGCTCTGG TACTGCTGGC GCTGCGAGAC GCCGCTGTCC
AACACCGAGA CCAAGATGGA CGACACCTAC CGGGACCGGC AGGACCCGGC GGTGACCGTC
GGCCTGCGCC TGGAGACCGG CGAGCTGGCC CTGGTGTGGA CGACCACGCC GTGGACGCTG
CCGTCGAACC TGGCCGCCGC CGTGCACCCG GACGTGGACT ACGTGACGGT CGAGGCGAAC
GGCGAGAAGT ACCTGCTCGC CGAGGCCCGC GTCGCCGCCT ACGCCCGCGA GCTGGGCGAG
GAGCCGCCGG TCGTGGCCCG CTGCAAGGGC TCCGACCTCG TCGGACGGCG CTACACCCCG
CCGTTCGACT TCTTCCTCGG CCGCGACAAC GCGCACCAGG TGCTGCCCGC CGACTACGTC
ACCACCGAGG ACGGCACCGG CATCGTCCAC ATCGCCCCCG CGTTCGGCGA GGACGACAAG
GCCGTCACGG ACGCCGCAGG CATCGAGGTC GTCGTCCCCG TCGACCCGCA CGGCTGCTTC
ACCGCCGAGG TGCCGCCGTA CGCCGGGCAG CACGTGTTCG AGGCCAACAA GGTCATCATC
CGCGACCTCA AGGACGCGGG GCTGCTGCTG CGCCACGAGA CCTACGACCA CCCGTACCCG
CACTGCTGGC GCTGCGACAA CCCGCTGATC CAGCGCGCGG TGTCGTCGTG GTTCGTCGCG
GTGACCCGGT TCCGCGACCG CATGGTCGAG CTGAACCAGC AGATCAACTG GGCGCCCGAG
CACATCAAGG ACGGCCAGTT CGGCAAGTGG CTGTCGAACG CGCGCGACTG GAACATCTCC
CGCAACCGGT TCTGGGGCTC CCCGATCCCG GTGTGGGTCT CGGACGACCC CGAGTTCCCG
CGCGTGGACG TGTACGGCTC GCTGGACGAG CTGGAGCGCG ACTTCGGCGT GCGCCCGACC
GACCTGCACC GGCCCGCGAT CGACGAGCTG ACCCGGCCCA ACCCGGACGA CCCGAGCGGG
AAGTCCACCA TGCGCCGGGT GCCCGAGGTG CTGGACTGCT GGTTCGAGTC CGGCTCGATG
TCGTTCGCCC AGGTGCACTA CCCGTTCGAG AACGCCGACT GGTTCGAGAA CCACTACCCC
GGCGACTTCA TCGTCGAGTA CAACGGGCAG ACCAGGGGCT GGTTCTACAC GCTGCACGTG
CTGGCCACGG CGCTGTTCGA CCGGCCCGCG TTCCGCAACT GCGTGGCGCA CGGCATCGTG
CTCGGCGACG ACGGGCAGAA GATGTCCAAG TCGCGCAAGA ACTACCCGGA CGTGAACGAG
GTGTTCGAGC GGGACGGCTC GGACGCGATG CGCTGGTTCC TGATGTCCTC GCCGATCCTG
CGCGGCGGCG ACCTGGTCGT CACCGAGCGG GGCATCCGCG ACGGGGTGCG GCAGGCCGTG
CTGCCGCTGT GGAACTCCTG GTACTTCCTG GCGCTGTACG CCAACGCCGA GGGCGTCGAG
GGCGCGTGGC GGACCGACTC GTCGCACGTG CTCGACCGGT ACGCGCTGGC CAAGACGCAC
GACCTCGTGG CGCGGGTGAC CGGGCAGCTC GACGAGTACG ACATCTCCGG CGCGTGCGCG
TCGGTCCGGG ACTTCCTGGA GGTGCTGACC AACTGGTACG TGCGGCGCTC GCGCGACCGG
TTCTGGGCGG GCGACCAGGA CGCGGTGGAC ACGCTGCACA CCGTGCTGGA GGTGGTGTCG
CGGGTGGCCG CGCCGCTGCT GCCGATGACC ACCGAGGTGG TGTGGCGCGG GCTGACCGGC
GGGCGCTCGG TGCACCTGAC CGACTACCCG GAGGCGGCCG ACCTGCCCGC CGACCCGGAG
CTGGTGGCGG CGATGGACGC GGTGCGGCAG GTGGCGTCGA CGGCGCTGTC GCTGCGCAAG
GCCAACAAGC TGCGGGTGCG GCTGCCGCTG GCCAAGCTGG TGATCGCGTC GCCGTCGGCT
GGGTCGCTGG AGGGGTTCCG GGAGATCCTG AGCGACGAGG TCAACGTCAA GGCGGTCGAG
CTGACCGACG ACGTGGACGC GCACGGGCAC TTCCAGCTGG CGGTGAACGC GCGGGCGGCC
GGGCCGAGGC TCGGGCCGAA CGTGCAGAAG GTGATCAAGG CGGTGAAGGC CGGGGACTGG
AGCGAGGTCG ACGGGCGCGT CGTCGCGGCC GGGATCGAGC TGTTCCCGCA GGAGTACGAG
CAGCGGCTCG TGGCCACCGA CCCGGCGGCC ACGGCGGCGC TGCCCGGCGG GGCGGGCCTG
GTCGTGCTGG ACACCGAGGT CACCGAGGAG CTGGCGGCCG AGGGCGTGGC TCGGGACCTG
GTGCGGGTCG TGCAGCAGGC GCGCAAGGAC GCCGGGCTGG ACGTGTCGGA CCGGATCGCG
CTGACCGTGG ACGCGCCCGA GGGCGCCGCG GCCGACGCGG CTCGGGCGTT CGAGGCGTTC
GTGCGCGAGG AGACGCTGGC GGTGGAGGTG GCCTACGGGG CCGTCGACGG CGGGTCCGAG
GGCGCGGTCG GCGACGGGGC CAAGGTGCGG GTGCTGGTCG TCAAGGCGGG CTGA
 
Protein sequence
MPYPKVGADS VPSQPSFPAL ERDVLGFWED DQTFQASVDA RPAGENGSNE FVFYDGPPFA 
NGLPHYGHLL TGYVKDLVPR YRTMRGQHVE RRFGWDTHGL PAEVEAEKQL GFSSKSDIEA
FGIDKFNDAC RTSVLRYTDQ WREYVTKQAR WVDFDNDYKT LDLDYMESVM WAFKTLWDKG
LVYEGFRVLW YCWRCETPLS NTETKMDDTY RDRQDPAVTV GLRLETGELA LVWTTTPWTL
PSNLAAAVHP DVDYVTVEAN GEKYLLAEAR VAAYARELGE EPPVVARCKG SDLVGRRYTP
PFDFFLGRDN AHQVLPADYV TTEDGTGIVH IAPAFGEDDK AVTDAAGIEV VVPVDPHGCF
TAEVPPYAGQ HVFEANKVII RDLKDAGLLL RHETYDHPYP HCWRCDNPLI QRAVSSWFVA
VTRFRDRMVE LNQQINWAPE HIKDGQFGKW LSNARDWNIS RNRFWGSPIP VWVSDDPEFP
RVDVYGSLDE LERDFGVRPT DLHRPAIDEL TRPNPDDPSG KSTMRRVPEV LDCWFESGSM
SFAQVHYPFE NADWFENHYP GDFIVEYNGQ TRGWFYTLHV LATALFDRPA FRNCVAHGIV
LGDDGQKMSK SRKNYPDVNE VFERDGSDAM RWFLMSSPIL RGGDLVVTER GIRDGVRQAV
LPLWNSWYFL ALYANAEGVE GAWRTDSSHV LDRYALAKTH DLVARVTGQL DEYDISGACA
SVRDFLEVLT NWYVRRSRDR FWAGDQDAVD TLHTVLEVVS RVAAPLLPMT TEVVWRGLTG
GRSVHLTDYP EAADLPADPE LVAAMDAVRQ VASTALSLRK ANKLRVRLPL AKLVIASPSA
GSLEGFREIL SDEVNVKAVE LTDDVDAHGH FQLAVNARAA GPRLGPNVQK VIKAVKAGDW
SEVDGRVVAA GIELFPQEYE QRLVATDPAA TAALPGGAGL VVLDTEVTEE LAAEGVARDL
VRVVQQARKD AGLDVSDRIA LTVDAPEGAA ADAARAFEAF VREETLAVEV AYGAVDGGSE
GAVGDGAKVR VLVVKAG