| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5749 |
|---|
| Symbol | |
|---|
| ID | 8329956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6778117 |
|---|
| End bp | 6779595 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644946186 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_003103409 |
|---|
| Protein GI | 256379749 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0152205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGACG TCAGCGTCAT CCTCGGTATC GGTGCAGCGG TTCTCATGGC CGCGGTGGTC
GCGGTCAGGG TCTCGACCAG GCTGGGACTG CCCTCACTGC TGCTGTACCT GGGAATCGGG
GTGCTGCTGG GCGAGTCGGT GCTCGGCATC CAGTTCTCCG ACGCCGACCT GACCCGCTCG
CTGGGCACCA TCGCCCTGGT CCTGATCCTC GTGGAAGGCG GTCTGACCAC CCGGTGGAGC
GCGGTGAAAC CCGCGCTGGG ACTGGGGATC GGGCTGTCGA CCGTGTCCGT CGGCATCTCG
ATCGGGGTCA CCGGGGTCGC GCTGCACCAC CTGCTCGGGC TCGACTGGCG CACCGCCCTG
CTGTGGGGCG CGGTGCTGTC GTCGACCGAC GCGGCGGCGG TGTTCAGCGT GCTGCGCGGG
GTCGGGGTCG GCAAGCGGTT GATCGGCGCG CTGGAGCTGG AGTCCGGCAT CAACGACGCG
CCGGTGTACA TCGCCGTGGT GCTGCTGGCG TCCACCGACG CGATCACCTG GACCGCGCCG
CTGCTGATGG TCTACGAGTT GCTCGCGGGC GCGGCCATCG GGATCGGGCT CGGCTGGCTC
GGCGCGCTCG GGCTGCGCAG GGCCGCGCTG CCCGCCACCG GCCTGTACCC GCTGGCGACC
GTCGCGGTGT GCCTGCTCGC CTACACGGTG GGCGACTTCG CGCACGCGTC CGGGTTCCTG
GCGGTGTACA CGGGCGCGGT GGTGCTCGGG AACGCGCGGC TGCCGCACCG GTCCGACACG
CTCTCGTTCG CCGAGGGGCT CGGGTGGGTC GCGCAGATCG GGCTGTTCGT GCTGCTCGGG
CTGTACTCGT CCCCGTCGCG CCTGGTCGAC GCCGTGGTGC CCGCGCTGGT CGCGGGCGCC
GTCCTGGTGC TGCTCGCGCG ACCCCTGTCG GTGGCCGCCG CCGCGCTGCC GTTCCGGGTG
CCGTGGCGCG AGCAGGTGTT CGTGTCCTGG TCGGGGCTGC GCGGGGCGGT GCCGATCGTG
TTCGCGCTGC TGCCGCTCGT CCAGGGCGTG GAGGGCGCGC TGGTCCTGGT GGACGTGGTG
TTCGTGCTGG TCGTGATCCT GACGATCGTG CAGGGCAGCA CGCTGCCGTG GATGGCGCGC
AAGCTCGGGC TGGTGAAGAC CGGGGAGGCC GAGGAGGTGC AGGTCGACTC GTCGGCGCTG
GACGAGCTGG GCGCCGAGCT GCTCCAGGTG CGCATCCAGA CGGGGTCGAA GCTGCACGGC
GTGTACCTGT CCGAGCTGAG GCTGCCGCCG GGGGCGATGG TGAGCCTGGT GGTGCGGGCC
GAGGAGGGCT TCACGCCGCA GGCGACCACG CGGTTGCAGG AGGGGGACCA GCTGCTGGTG
GTCAGCACGG ACGCGGCGCG GGACGCGGCG GAGACCCGGA TCCGGGAGGT CGACAAGGGC
GGGCGGTACG CGCGCTGGAA GGGCAGCGCG CCGACCTGA
|
|---|
| Protein sequence | MGDVSVILGI GAAVLMAAVV AVRVSTRLGL PSLLLYLGIG VLLGESVLGI QFSDADLTRS
LGTIALVLIL VEGGLTTRWS AVKPALGLGI GLSTVSVGIS IGVTGVALHH LLGLDWRTAL
LWGAVLSSTD AAAVFSVLRG VGVGKRLIGA LELESGINDA PVYIAVVLLA STDAITWTAP
LLMVYELLAG AAIGIGLGWL GALGLRRAAL PATGLYPLAT VAVCLLAYTV GDFAHASGFL
AVYTGAVVLG NARLPHRSDT LSFAEGLGWV AQIGLFVLLG LYSSPSRLVD AVVPALVAGA
VLVLLARPLS VAAAALPFRV PWREQVFVSW SGLRGAVPIV FALLPLVQGV EGALVLVDVV
FVLVVILTIV QGSTLPWMAR KLGLVKTGEA EEVQVDSSAL DELGAELLQV RIQTGSKLHG
VYLSELRLPP GAMVSLVVRA EEGFTPQATT RLQEGDQLLV VSTDAARDAA ETRIREVDKG
GRYARWKGSA PT
|
|---|
| |