Gene Amir_5734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5734 
Symbol 
ID8329941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6759781 
End bp6761052 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content72% 
IMG OID644946171 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003103394 
Protein GI256379734 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCA CCGCACCGGA CAGCGCCACG TCCAGCGACG AGAACGGCCG GTTCGCCTGG 
TACCGCACCC TCGGGCAGCG CGGAAGGCGC GCCTTCGTCG GCGCGTTCGG CGGCTACGGC
CTCGACTCCT ACGACTTCCA GGTCCTGCCG CTGGGCCTGG TCGCCATCAC CGCCTACTTC
GGCATCACCA AGGGCGAGGC GGGCCTGCTC ACCACGGTCA CCCTCGTGGT GAGCGCGCTC
GGCGGCGCCA TCGCGGGCGT GCTCGCCGAC CGCCTCGGCC GCACCCGCGC CCTGATGATC
ACCGTCGTCA CCTACGCCGT GTTCACCGTC CTGTGCGGGT TCGCCACCAG CTACGAGATG
CTCCTGGTGT TCCGCGCCCT GCAGGGCCTG GGCTTCGGCG GCGAGTGGGC GGTCGGCGCG
ATCCTGGTCG CCGAGTACTG CCAACCCCGC TACCGGGGTC GCACCGTCGC GTTCATCCAG
AGCTCGTGGG CGGTCGGCTG GGCGCTGTCG GTGCTGGTCT ACGCGCTGGT GTTCGAGCTG
GTGCACCCCG ACCTGGCCTG GCGGGTGCTG TTCTTCACCG GCGCGCTGCC CGCCCTGCTG
ATCATCTACG TCCGCCGCCG CGTCCAGGAC GCCCCCGAGG CCACCGCCCG CCGCACCGCC
AGCGCCGAGC GCGGCTCGTT CGGCGCGATC TTCACCGGCC CGCTGGCCCG CACCACCCTG
TTCGCGTCCC TGCTGGCCAC GGGCGTGCAG GGCGGCTACT ACACGCTCGC GACCTGGCTG
CCGACGTACC TGAAGTCCGA GCGCGGCCTG ACCGTCATCG GCACCGGCGG CTACCTGGCG
TTCCTGATCT CCGGCGCGTT CACCGGCTAC GTGTGCGGCG GGCACCTGAC CGACAAGCTG
GGCCGCAAGC GCACGTTCGC GCTGTTCTCG GTGCTGTCGG CGGCGCTGAT CCTGCTCTAC
ACCCGCATCC CGGAGGGCGC GAACACCACG ATCCTGTTCC TGGGCTTCCC GCTGGGCTTC
TGCATGTCGG CGATCTTCAG CGGGTTCGGC TCGTTCCTGT CGGAGCTGTA CCCGGCGCAC
CTGCGCGGCA CCGGCCAGGG CTTCACCTAC AACTCCGGGC GGGCCGTGGG CGCGCTGTTC
CCGGCGGCGG TCGGGTTCGC GGCCGAGAGC GCGGGCGTGG GCGGCGCGAT GGCGTTCGGG
GCGGCGGCCT ACGGCATCGC GGTGCTGGCG CTGCTGGGCC TGCCGGAGAC GCTCGGCCGG
GAGCTGGGGT GA
 
Protein sequence
MSATAPDSAT SSDENGRFAW YRTLGQRGRR AFVGAFGGYG LDSYDFQVLP LGLVAITAYF 
GITKGEAGLL TTVTLVVSAL GGAIAGVLAD RLGRTRALMI TVVTYAVFTV LCGFATSYEM
LLVFRALQGL GFGGEWAVGA ILVAEYCQPR YRGRTVAFIQ SSWAVGWALS VLVYALVFEL
VHPDLAWRVL FFTGALPALL IIYVRRRVQD APEATARRTA SAERGSFGAI FTGPLARTTL
FASLLATGVQ GGYYTLATWL PTYLKSERGL TVIGTGGYLA FLISGAFTGY VCGGHLTDKL
GRKRTFALFS VLSAALILLY TRIPEGANTT ILFLGFPLGF CMSAIFSGFG SFLSELYPAH
LRGTGQGFTY NSGRAVGALF PAAVGFAAES AGVGGAMAFG AAAYGIAVLA LLGLPETLGR
ELG