Gene Amir_5732 details

Gene Information

• Locus tag: Amir_5732
• ID: 8329939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6757680
• End bp: 6758360
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644946170
• Product: peptidase S16 lon domain protein
• Protein accession: YP_003103393
• Protein GI: 256379733
• COG category: [R] General function prediction only
• COG ID: [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGTCGA CGCTCCCGTT GTTCCCGCTC GGAACCGTGC TGCTGCCCGG GGCGTCCCTG 
CCACTGCACA TCTTCGAGCC GCGCTACCGG CAGTTGACCG TGGACCTGGT GACCGGCGCC 
GTGCCGGACC GCAGCTTCGG GGTCGTCTCC ATCAAGCAGG GCTGGGAGGT CGGGGCGGAG 
AACGTGCAGG CGCTGCAGGC GGTCGGCTGC TCGGCGGTGC TCCAGGACAC GCACCGCTTC 
CCGGACGGCA GGTTCGACCT GGCGACGGTG GGCGGCAGCA GGTTCCGGCT GCTGGAGGTG 
GAGGAGAACG CGGCGCCCTA CCTGGTGGGC AAGGTGGAGT GGTTGCCGGA CACCCCGTCG 
CCGCCGGAGC TGGAGTCCGT GCTGCCGCTG CTGGCCGCGA GCGCCCAGGC CGCGCACGCC 
CGGTACCGGG AGGCGGCGCG GTTCGAGCGG GAGTGGTTCC CCGAGCACTC GCCGGAGATG 
TTCGACGACC TGGCCTACCG GCTGGCCAGC GACTGCCTGA TGACGATGGA GGACCGGCAG 
CGGCTGCTGG AGGAGACCGT GGAGGCGCGG CGACTCCGGT TGGTGCGCAA GGTCCTGCAC 
CGCGAGGCCG GGCTGCTGGC GGCGCTGCGG GCGGTGCCCG CGCCCCTGTC GGAGTTCGGC 
CACCCGCCGA ACCGGAACTG A 

 

Protein sequence

MTSTLPLFPL GTVLLPGASL PLHIFEPRYR QLTVDLVTGA VPDRSFGVVS IKQGWEVGAE 
NVQALQAVGC SAVLQDTHRF PDGRFDLATV GGSRFRLLEV EENAAPYLVG KVEWLPDTPS 
PPELESVLPL LAASAQAAHA RYREAARFER EWFPEHSPEM FDDLAYRLAS DCLMTMEDRQ 
RLLEETVEAR RLRLVRKVLH REAGLLAALR AVPAPLSEFG HPPNRN