Gene Amir_5705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5705 
Symbol 
ID8329912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6735739 
End bp6736401 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID644946143 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003103366 
Protein GI256379706 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGCGG TGGACGGCGG TGAGCCGAAG CGCCGGGGAC GGCGCGCGGG CGGCGAGGAC 
ACCAGGGGCG CGCTGCTCCA GGCGGCGCGC GAGGTGTTCG TCGAGCGCGG CTACGAGGGC 
GCGACGGTGC GGGCCATCGC GGCGCGCGCG GGCGTGGACG CCGCGATGGT CAACCACTGG 
TTCGGCGGCA AGCAGGCGCT GTTCGCGAAG GCCGTGCTGC AGCTGCCCGT CGACCCGGTG 
GAGATCGTCC GCCGGATCGC CCAGGGCCCG CCCGAGCTGC TGGGCGAGCG CCTGGTGCGC 
ACGTTCCTCG GGGTGTGGGA CGCCACCGGC GGCGGCGCGT TCTCCGCGCT GGTGCGCAGC 
GTCGCCGGGC ACGAGCAGGT CACCCACGCC CTGCACGACC TGTTCATCAA GACCGTGCTG 
GGCCAGGTGA TGCGGGCGTT CGACGTGGAC CGGCCCGAGC TGCGCGCCAC GCTGTGCGCC 
TCGCAGATGG TCGGTCTCGG CATGACGCGG TACGTGCTGG AGTTCGAGCC GCTGGCGTCG 
GCCGACCCCG AGGCGCTGGT CTCGGCGGTC GGGCCGACGC TCCAGCGCTA CCTGTCCGGC 
GACATCGGCT CAGTCGACAT CGGCTCCGGC GGCATCAGCG AGGTCGCGTC GAAGCAGGTG 
TGA
 
Protein sequence
MVAVDGGEPK RRGRRAGGED TRGALLQAAR EVFVERGYEG ATVRAIAARA GVDAAMVNHW 
FGGKQALFAK AVLQLPVDPV EIVRRIAQGP PELLGERLVR TFLGVWDATG GGAFSALVRS 
VAGHEQVTHA LHDLFIKTVL GQVMRAFDVD RPELRATLCA SQMVGLGMTR YVLEFEPLAS 
ADPEALVSAV GPTLQRYLSG DIGSVDIGSG GISEVASKQV