Gene Amir_5448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5448 
Symbol 
ID8329654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6474160 
End bp6474789 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content75% 
IMG OID644945889 
ProductDNA-3-methyladenine glycosylase 
Protein accessionYP_003103113 
Protein GI256379453 
COG category[L] Replication, recombination and repair 
COG ID[COG2094] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00567] DNA-3-methyladenine glycosylase (3mg) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGCTC CCGCTGACCC CGCGCGCAGG CAGCTGACCG AGCAGGAGCT GGCGGTCGAC 
CCGGTCGACG CCGCCAAGCT CCTGCTCGGC GCGGTCCTGG AGAGCACCAC CGACGAGGGC 
GCCGTCGGCG TGCGGATCGT CGAGGTCGAG GCGTACCGGG GCGGCGACGA CCCCGCGTCG 
CACTGCTACC GGGGGCGCAC CCCGCGCAAC GACGTCATGT TCGGCCCGGC CGGTCACCTG 
TACGTGTACT TCGTGTACGG GATGCACTTC TGCTGCAACG TCGTCTCGCT CACCGACGGC 
GTGCCGGGGG CGGTGCTGAT CAGGGCGGGC GAGGTGGTGT CCGGGATCGA GCTGGCCCGC 
GCCCGCAGGC CCGCCGCCCG CACCGACGCC GAGCTGGCCA AGGGCCCCGC CCGGCTCACC 
GGCGTGCTCG GCCTCGACCG CGCCCACAAC GGCGTCGACC TCACCTCGGC CGACTCCACC 
GTGCGGCTCT ACGCGGGCGA GCCCGTCGGG GCTGTCCGCA CCGGACCGCG CGTGGGCGTG 
GCCGTCGCGG TGGACGTCCC CTGGCGCTTC TGGGTCGACT CGCCCGCGGT CAGCGCCTAC 
CGCAAGGGCG GGCGCACGCG GGTCCGCTGA
 
Protein sequence
MPAPADPARR QLTEQELAVD PVDAAKLLLG AVLESTTDEG AVGVRIVEVE AYRGGDDPAS 
HCYRGRTPRN DVMFGPAGHL YVYFVYGMHF CCNVVSLTDG VPGAVLIRAG EVVSGIELAR 
ARRPAARTDA ELAKGPARLT GVLGLDRAHN GVDLTSADST VRLYAGEPVG AVRTGPRVGV 
AVAVDVPWRF WVDSPAVSAY RKGGRTRVR