Gene Amir_5408 details

Gene Information

• Locus tag: Amir_5408
• ID: 8329610
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 6421844
• End bp: 6423712
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 644945845
• Product: serine/threonine protein kinase
• Protein accession: YP_003103073
• Protein GI: 256379413
• COG category: [K] Transcription; [L] Replication, recombination and repair; [R] General function prediction only; [T] Signal transduction mechanisms
• COG ID: [COG0515] Serine/threonine protein kinase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.212471
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCTG AGACGTTCGG GCCGTACCGC GTCGAGGGCC TGCTCGGTCG CGGCGGCATG 
GGCGAGGTGC ACCGCGCCTA CGACACCGCG CACGACCGGG TCGTGGCGCT GAAGCGGCTG 
TCGGCGGTGT ACCACTCGGA CGCCGAGTTC CGGGCCCGGT TCCGGCGGGA GTCGCAGGTC 
GCGGCCCGGT TGCGGGAGCC GCACGTGATC CCGATCCACG CCTACGGCGA GATCGACGGC 
ACGCTGTACC TGGACATGCG GCTGGTCGAG GGCGAGGACC TGTCGGACGT GCTGGAGCGC 
GGGCCGATCG AGCCCGAGCG GGCGGTGCGG ATCGTGCGGC AGACCGCGAG CGCGCTGGAC 
GCCGCGCACG CCGACGGGCT GGTGCACCGG GACGTGAAGC CGTCCAACAT CCTGCTGTCG 
GCCGGGGACT TCGTGTACCT GGTCGACTTC GGCATCGCCC GCAGCGCCGC CGGGGACAGC 
ACGCACATCA CCGCGTCCGG CGAGGTGCTG GGGACGCTGG ACTACATGGC GCCCGAGCGG 
TTCAGCGGGA CCGACGTGAG CGGCGCGGTG GACGTGTACG CGCTGGCCGG GGTGCTGTTC 
GCCTGCCTGA CCGGGCGCAG GCCGTTCACC GCCGAGGGCA CGGCCGCGCA GATCTGGGCG 
CACATGCAGG AGGAGCCGCC GAGGCCGTCC GAGGTGCGGC CGGGGGTGCC CGCGGCGCTG 
GACGCGGTGA TCGCGCGCGG CATGGCGAAG GACCCGGCCG CCCGGTACCC GACCGCGAGC 
GCCCTGGCCG AGGCGGCTGC GGCGGCGCTG GACGGGACGG CGGTGGTGCC CACCGGGACG 
CGGGTGCTCC AGCAGACCGG GCCGCAGGGG GAGCCGCAGC GGGTGGGGCC GCCCTCGCAG 
CCGGTCCCGG CGCAGACCCC GCCCGCCCAG CACCAGCCAG CCCAGCAGCA GCCAGCGCAG 
AGCCAGTCAG CGCAGAGCCG GCCAGCGCGC ACCGCGCAGC AGCACCCGCC GGTGCCGACC 
GCGCCGAACA CCCGCCCTCA GCAGCACGGG CCGTTCTCCG GACCGCAGCA GACGTCGTTC 
TCCGGGCCCC GGCAGACCTC CTTCTCCGGG CCCCAGCGGT TCCCGCTCTC CGGCCCCCAG 
CCGGGCTGGG GCCACCCGCC CGCGACCGCC TCGAAGCGGT CCGTGCAGCT CGCCGTGCTC 
GGCGCGGCGC TGGTGGTGCT GGTGGTGGCG GGCGCGATCG GCGCGGCGAC CTGGCCGTGG 
GGCGGGAAGG CGCAGACCGG TCAGGGCGGT GGCACGAGCA GCACCGCGTC GACCACGACC 
ACCACCGGGA CCACCGGGAC CACCACCGAC ACGACGACCA CCGCCCCCCG CAGCGGCTCC 
GCCGAGGACC AGCGGGTGCT GTCCGAGCGG CTGCCGCTGG TGTACCGGCT GTCGTCCTCG 
TGCTCGGACG GCGACGTGGG CGGCACCGGC GCGGTGGCCG CGGCGACCTG CGGTGAGCCC 
AAGTCGGAGG TGGCGGGCAC GACCCCGCCG ACCAGGGCCG ACTTCCTGCT GTTCGCCGAC 
CGCGCCGCGC AGGACAAGCA CTTCCAGGAC CTGGTCAAGG CCAACGACAT CCCGCGCGAC 
GACACCCAGG GCGGCTGCCG CCCCACCACG CAGAAGACGC ACTACTCGAC CTACTGGCGC 
CAGGTCACCG GGGTGACCGA GGGCGACTTC ACCACGTGCT TCGTCAAGGA CGGCAGCGGC 
CAGGTGTGGT GGGTGGACAC CGAGACGCTG ACCACCGGCG TGCTGCTGTC CACCACCGCC 
ACCACCCCGG ACAAGCTGGA GGCGCTGGAC CTGTGGTGGA ACATGTGGGT GCTGTCCCAG 
GACCGCTAG 

 

Protein sequence

MSAETFGPYR VEGLLGRGGM GEVHRAYDTA HDRVVALKRL SAVYHSDAEF RARFRRESQV 
AARLREPHVI PIHAYGEIDG TLYLDMRLVE GEDLSDVLER GPIEPERAVR IVRQTASALD 
AAHADGLVHR DVKPSNILLS AGDFVYLVDF GIARSAAGDS THITASGEVL GTLDYMAPER 
FSGTDVSGAV DVYALAGVLF ACLTGRRPFT AEGTAAQIWA HMQEEPPRPS EVRPGVPAAL 
DAVIARGMAK DPAARYPTAS ALAEAAAAAL DGTAVVPTGT RVLQQTGPQG EPQRVGPPSQ 
PVPAQTPPAQ HQPAQQQPAQ SQSAQSRPAR TAQQHPPVPT APNTRPQQHG PFSGPQQTSF 
SGPRQTSFSG PQRFPLSGPQ PGWGHPPATA SKRSVQLAVL GAALVVLVVA GAIGAATWPW 
GGKAQTGQGG GTSSTASTTT TTGTTGTTTD TTTTAPRSGS AEDQRVLSER LPLVYRLSSS 
CSDGDVGGTG AVAAATCGEP KSEVAGTTPP TRADFLLFAD RAAQDKHFQD LVKANDIPRD 
DTQGGCRPTT QKTHYSTYWR QVTGVTEGDF TTCFVKDGSG QVWWVDTETL TTGVLLSTTA 
TTPDKLEALD LWWNMWVLSQ DR