| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5399 |
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| Symbol | |
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| ID | 8329601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6414838 |
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| End bp | 6415569 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644945836 |
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| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
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| Protein accession | YP_003103064 |
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| Protein GI | 256379404 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.189435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGG TAATGGACTT CCAACCGTTG TTCCGCGAGT TGGCCGAGGC GCAGTCGCGC
GTCGAACGCC GCCAGGAGCT GCGGGACCAG CTGGTGACGG AGTACCTGCC GGTCGCCTGG
CACATCGCCG ACCGGTTCGC CGAGCGCGGC GAGTCGGTGG AGGACCTGCG GCAGGTGGCC
GCCGTGGGCC TGATCCACGC GGTGGACCGG TTCGACGTGC AGCGCGGCAT CGACTTCCTC
GCGTTCGCCG TCCCGACCAT CACCGGCGAG GTGCGCCGCC ACCTGCGCGA CCAGGGGTGG
GCGGTGCGGG TGCCGCGCAG GCTCAAGGAG CTGTGCCTGG CCATCGACGC CGCCCGCGTC
GAGCTGGCCC GCGCGAGCGG TCGCACGCCG ACGCCGAGCG AGGTCGCCAG GCACCTGAAC
CTCTCGCTCG CCGAGGTCTA CGAGGGGCTG CACGCCACCT CCGCCAACCA CATGGTCTCC
CTGGACGAGG TGGACTCCGA CCACCGCCTG GGCGTCGACG ATCCGGCTCT GGAGGTGGTC
GAGCTCCAGC ACGCGCTTGA TCCGATGCTT CGCGGGCTAC CCAAGAGGGA GCGGAGGATC
GTGCTGCTGC GGTTCTTCAG GAACATGACG CAGAGCCAGA TCGCCGACTC GGTGGGCGTG
TCGCAGATGC ACGTGTCGCG CCTGCTGAGC CGGTCGCTCG CCCGCCTGCG GGACCTGCTC
GACGAACGCT GA
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| Protein sequence | MSAVMDFQPL FRELAEAQSR VERRQELRDQ LVTEYLPVAW HIADRFAERG ESVEDLRQVA
AVGLIHAVDR FDVQRGIDFL AFAVPTITGE VRRHLRDQGW AVRVPRRLKE LCLAIDAARV
ELARASGRTP TPSEVARHLN LSLAEVYEGL HATSANHMVS LDEVDSDHRL GVDDPALEVV
ELQHALDPML RGLPKRERRI VLLRFFRNMT QSQIADSVGV SQMHVSRLLS RSLARLRDLL
DER
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