| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5383 |
|---|
| Symbol | |
|---|
| ID | 8329585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6397674 |
|---|
| End bp | 6397955 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644945820 |
|---|
| Product | PAAR repeat-containing protein |
|---|
| Protein accession | YP_003103048 |
|---|
| Protein GI | 256379388 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4104] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCAG CGGCCAGGGT CGGGGACCCG ACCGGCCACC CCGGCACCGT CGCGCCGCCC
GGCGTGCCCA CGGTGCTGAT CGGCGGAGTG CCCGCCGCCA CCGTGGGCGG GCTGCACACC
TGCGCGTTCC CCGGCGTGCC ACCGCACCCG CCGACGCCCA TCCTGCCGCC CGGCTGCCCC
ACCGTGCTCC TGGGCGGCAA ACCCGCCGCC CGGCTCGGCG ACCTGGCCTC GTGCGGCGCG
CCCATCGTCA TGGGCTGCCC CACCGTCGTG ATCGGAGGCT GA
|
|---|
| Protein sequence | MPPAARVGDP TGHPGTVAPP GVPTVLIGGV PAATVGGLHT CAFPGVPPHP PTPILPPGCP
TVLLGGKPAA RLGDLASCGA PIVMGCPTVV IGG
|
|---|
| |