Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5344 |
Symbol | |
ID | 8329546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6357740 |
End bp | 6359074 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644945782 |
Product | protein of unknown function DUF21 |
Protein accession | YP_003103010 |
Protein GI | 256379350 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.308769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTGGAA TCCTGCTGAG CGTGCTCGGC CTGCTGGCCG TCGTGGCGCT GACCGCGGGC ACGTTCATCG CGGTCGCGGC GGAGTTCTCG CTGACCGCGC TGGAGCGGAG CACAGTCGAA TCGCACGTCG CCCACGTGGG CGACGCCAAG GCCAAGGCCG TCGACAAGGC CCACCGGTCC CTGTCGTTCC AGCTCTCCGG AGCCCAGCTG GCCATCACGT TCACCACCCT GATCACCGGC TACATCGCCG AACCGGCCAT CGCGCAGCTG CTGTCGCCGG GTCTGACGGC GGTGGGGGTC CCCACGTCCG TCGCGGCCCC GATCTCGCTG GCCATCGCGC TGGCGCTGGC CACGACGCTG TCGATGGTGT TCGGCGAGCT GGTCCCGAAG AACCTGGCGA TCTCCAGACC GCTGGAGACG GCGCGCGCCG TCGCGGGGTT GCAGGCCGGG TTCTCGTCGG TCTTCCGCTG GTTGATCAAC GGCATGAACG GCGCGGCGAA CTGGATGGTG CGCAGGCTCG GCGTCGAGCC CGCGGAGGAG CTGGCCTCGG CCCGCTCGCC GCAGGAGCTG GGCGCGCTGG TCCGCTCCAG CGCCGAGCAC GGCACGATCG ACGAGGGCAC GGCCGCCCTG CTGGGCCGGT CGCTGCGCTT CGGCGACCGC ACGGCGGGCG AGCTGATGAC CCCGCGCGTG CGGGTGGAGT CGCTGCGCGC CGACGCGACC GTGCTCGACC TGGTCGCCAA GGCCCGCGAG ACGGGCAAGT CCCGCTTCCC GGTGCACTCG GGCGACCTGG ACGAGGTGCG CGGCATCGTG CACGTCAAGC AGGCGTTCAG CGTGCCGCGC GAGCGCCGGG CGACCACGCC GCTGTCGGCG CTGACCAGGC CGGTGCAGAC GGTGCCGGAG ACCCTGGAGG GCGACGCGCT GCTGGACCGG CTGCGCGCGT CCGGGTTGCA GACCGCGCTG GTCGTCGACG AGTACGGCGG CACGGCCGGG CTGGTCACCC TGGAGGACGT GGTGGAGGAG ATCGTCGGCG ACGTGCGCGA CGAGCACGAC CGCCGCGAGT CCGCGCCGGT GCGCGCGCTG GGCGGGGACA GCTGGATGGT CTCCGGTCTG CTGCGCGACG ACGAGGTGGC CGAGGCGACC GGGTTCCGGA TGCCCGAGGG CGACTACGAG ACCCTCGCGG GGCTGGTGCT GTCCGAGCTG GGGCGCATCC CGGACGTCGG TGACGAGGTT CACCTGGACG GGTGGCGGAT CACCGTGATG CAGATGGAGA AGCACCGGGT GGCCGAGCTG CGGGTGGCCA AGGTCGAGTC GGCCGAGACG GGGGTGTCCC GGTGA
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Protein sequence | MTGILLSVLG LLAVVALTAG TFIAVAAEFS LTALERSTVE SHVAHVGDAK AKAVDKAHRS LSFQLSGAQL AITFTTLITG YIAEPAIAQL LSPGLTAVGV PTSVAAPISL AIALALATTL SMVFGELVPK NLAISRPLET ARAVAGLQAG FSSVFRWLIN GMNGAANWMV RRLGVEPAEE LASARSPQEL GALVRSSAEH GTIDEGTAAL LGRSLRFGDR TAGELMTPRV RVESLRADAT VLDLVAKARE TGKSRFPVHS GDLDEVRGIV HVKQAFSVPR ERRATTPLSA LTRPVQTVPE TLEGDALLDR LRASGLQTAL VVDEYGGTAG LVTLEDVVEE IVGDVRDEHD RRESAPVRAL GGDSWMVSGL LRDDEVAEAT GFRMPEGDYE TLAGLVLSEL GRIPDVGDEV HLDGWRITVM QMEKHRVAEL RVAKVESAET GVSR
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