Gene Amir_5316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5316 
Symbol 
ID8329518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6322251 
End bp6322949 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content75% 
IMG OID644945755 
ProductMOSC domain containing protein 
Protein accessionYP_003102983 
Protein GI256379323 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00687382 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGAG TGCTGTCGGT CAACACGGGG GTTCGCGTCC CGTTCGAGGG CGTGCGGATC 
GGCGAGTCCG CGATCGGCAA GCGGCCCGTC GAGGGGGCCG TGGCGCTGGA CGTGCCCGGA
GCCGGGATGA GCGGCGTGTC CGGGGACGAG ATCTCCGACG AGGTCAACCA CGGTGGGCCG
GACCAGGCCG TGTACGCCTA CGCCCGCGAG GAGCTGGCGG TGTGGGAGGC GGAGCTGGGG
CGCGAGCTGC CCGCCGGGCT GTTCGGCGAG AACCTGACCA CCGAGGGCGT GGCGGTGTCG
GACGCGCTGG TGGGCGAGCG GTGGCGGGTG GGGACGGCGC TGCTGGAGGT CACCGCGCCG
CGCATCCCGT GCCGGACGTT CGCGCTGGTG CTGGACGAGC CGCAGTGGGT CAAGCGGTTC
ACCGCCCGCG CGCTGCCGGG GGCGTACCTC CGGGTGCTGG AGCCGGGTTC GGTGCGCGCC
GGGGACGGGA TCGAGGTGGT CGAGCGGCCG GAGCACGGGA TCACGGCGGC CGTGGTGTTC
CGGGCGCTCC AGCTGGAGCC GGGACTGCTG CCGTCGCTGG TCGGTGTGGC CGGGCTGTCC
GAGGAGGTCC GCGAGAAGGT CGCCAAGCGC GTGGCGCGGG CGCGCCGAGG AGCCGAGAGC
GGGGGAGCCG GAGACGGGCG CGGGGCGGCG GTCCGGTGA
 
Protein sequence
MSRVLSVNTG VRVPFEGVRI GESAIGKRPV EGAVALDVPG AGMSGVSGDE ISDEVNHGGP 
DQAVYAYARE ELAVWEAELG RELPAGLFGE NLTTEGVAVS DALVGERWRV GTALLEVTAP
RIPCRTFALV LDEPQWVKRF TARALPGAYL RVLEPGSVRA GDGIEVVERP EHGITAAVVF
RALQLEPGLL PSLVGVAGLS EEVREKVAKR VARARRGAES GGAGDGRGAA VR